{"id":"W4404394833","doi":"10.1016/j.cub.2024.10.044","title":"Genome dynamics across the evolutionary transition to endosymbiosis","year":2024,"lang":"en","type":"article","venue":"Current Biology","topic":"Insect symbiosis and bacterial influences","field":"Agricultural and Biological Sciences","cited_by":41,"is_retracted":false,"has_abstract":true,"ca_institutions":"University of British Columbia; University of Victoria","funders":"Biotechnology and Biological Sciences Research Council; Natural Environment Research Council; Sight Research UK","keywords":"Biology; Endosymbiosis; Evolutionary biology; Genome; Transition (genetics); Evolutionary dynamics; Computational biology; Genetics; Plastid; Gene","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001681898,0.000181487,0.0002032971,0.0006827846,0.0002766947,0.00059664,0.0002311666,0.0004592284,0.0007053034],"category_scores_gemma":[0.0006623817,0.0001807068,0.0002282312,0.0005795045,0.0002735928,0.000478385,0.0006167946,0.0005654994,0.0002011484],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0003215932,"about_ca_system_score_gemma":0.0001816823,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.001112456,"about_ca_topic_score_gemma":0.001049923,"domain_scores_codex":[0.9998199,0.00002138049,0.000009581656,0.00007345134,0.00003706449,0.00003862708],"domain_scores_gemma":[0.9996682,0.00008154417,0.00009016687,0.00002764496,0.00006400311,0.00006839258],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","study_design_scores_codex":[0.0004850169,0.00005096168,0.07597143,0.0001198364,0.00006820876,0.0002875865,0.0008293248,0.00156782,0.9048647,0.0009211859,0.0001682715,0.01466572],"study_design_scores_gemma":[0.00001680558,0.0005791611,0.894457,0.00003279767,0.0001016474,0.001058297,0.001330119,0.007845104,0.08400901,0.001575881,0.008927363,0.00006678951],"study_design_candidate":"observational","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9984481,0.0002938382,0.0004309917,0.00003313941,0.00000378113,0.000002661444,0.0002540345,0.00001657453,0.0005168],"genre_scores_gemma":[0.9977737,0.0001934814,0.0008406347,0.00003352261,0.000003751704,0.00001048307,0.0007805498,0.00001422005,0.0003495927],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.001112456,"threshold_uncertainty_score":0.00235945,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.02286421544897686,"score_gpt":0.2797004659597071,"score_spread":0.2568362505107302,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}