{"id":"W4404405551","doi":"10.1101/2024.11.11.24316310","title":"Primary Central Nervous System Lymphoma Tumor Biopsies Show Heterogeneity in Gene Expression Profiles and Genetic Subtypes","year":2024,"lang":"en","type":"preprint","venue":"medRxiv","topic":"CNS Lymphoma Diagnosis and Treatment","field":"Medicine","cited_by":0,"is_retracted":false,"has_abstract":true,"ca_institutions":"Spinal Cord Injury BC","funders":"","keywords":"In vitro; Lymphoma; Gene; Gene expression; Primary central nervous system lymphoma; Biology; Cancer research; Kinase; Central nervous system; Genetics; Immunology; Neuroscience","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000116235,0.0001211876,0.0001445941,0.0005462364,0.0001468837,0.0003124671,0.00008447181,0.0001729071,0.001338254],"category_scores_gemma":[0.0002048746,0.00007605481,0.00009628983,0.000418575,0.000172561,0.00009163169,0.0001827853,0.000120663,0.000327017],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0001414269,"about_ca_system_score_gemma":0.00007946995,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0006758603,"about_ca_topic_score_gemma":0.001740347,"domain_scores_codex":[0.9998733,0.00001244115,0.00001081075,0.00003632936,0.00003544585,0.00003164681],"domain_scores_gemma":[0.9999135,0.00002216961,0.00002254679,0.000006256852,0.00001719315,0.00001838465],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","study_design_scores_codex":[0.001118429,0.00007168138,0.4214697,0.0001546386,0.0001709118,0.00187194,0.0004291102,0.0001627038,0.5507095,0.00008177773,0.0004632315,0.02329634],"study_design_scores_gemma":[0.00002081834,0.0001573754,0.9530711,0.00001734303,0.00007692821,0.005942642,0.0003965021,0.0003102875,0.03861201,0.0001007685,0.001289362,0.000004762601],"study_design_candidate":"observational","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.998363,0.0004505255,0.0003022437,0.00001144871,0.000002190084,0.000008822439,0.0003315793,0.00001102972,0.0005192905],"genre_scores_gemma":[0.9977568,0.0003075268,0.0005008707,0.00002646526,0.000003644894,0.00001704324,0.001041005,0.000006502908,0.0003401384],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.001338254,"threshold_uncertainty_score":0.004476845,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.01497392515673761,"score_gpt":0.2442104708018754,"score_spread":0.2292365456451378,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}