{"id":"W4404556839","doi":"10.2196/50712","title":"Identifying Safeguards Disabled by Epstein-Barr Virus Infections in Genomes From Patients With Breast Cancer: Chromosomal Bioinformatics Analysis","year":2024,"lang":"en","type":"article","venue":"JMIRx Med","topic":"Viral-associated cancers and disorders","field":"Medicine","cited_by":5,"is_retracted":false,"has_abstract":true,"ca_institutions":"","funders":"","keywords":"Biology; Breast cancer; Breakpoint; Cancer; Genome; Virus; Cancer research; Gene; Virology; Genetics; Chromosome","routes":{"ca_aff":false,"ca_fund":false,"ca_venue":true,"about_ca":false,"invisible_to_affiliation_only":true},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0009589567,0.0005134817,0.0007063443,0.003222858,0.0005614846,0.001123292,0.000651611,0.0006898358,0.002836825],"category_scores_gemma":[0.005117875,0.0001980693,0.001328552,0.00282613,0.000218534,0.0003599306,0.0008692304,0.0006352926,0.001455011],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0006060748,"about_ca_system_score_gemma":0.0008142308,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.003673319,"about_ca_topic_score_gemma":0.005741154,"domain_scores_codex":[0.9990633,0.000121951,0.000104416,0.0004697241,0.0001438184,0.0000967428],"domain_scores_gemma":[0.9983626,0.0008126237,0.0003077326,0.0001500388,0.0002434112,0.0001235233],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"observational","study_design_scores_codex":[0.002977113,0.0003345839,0.7184625,0.001777344,0.001105851,0.001791052,0.0006160905,0.01176136,0.03324814,0.001451834,0.02645895,0.2000152],"study_design_scores_gemma":[0.0003923821,0.0008550354,0.7885182,0.0003158768,0.001479725,0.004616383,0.001525189,0.1151148,0.02056115,0.006690579,0.0597988,0.000131903],"study_design_candidate":"observational","study_design_consensus":"observational","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.869774,0.004704294,0.02507012,0.001352013,0.0001288153,0.0002160089,0.09255753,0.003096295,0.003101035],"genre_scores_gemma":[0.8078904,0.001281127,0.03804813,0.0003158493,0.0000688865,0.0002498734,0.1509633,0.0002485373,0.0009339058],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.003673319,"threshold_uncertainty_score":0.009490132,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.006518920951877056,"score_gpt":0.2601187364712088,"score_spread":0.2535998155193318,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}