{"id":"W4404601389","doi":"10.1038/s44298-024-00067-9","title":"Reduced cross-protective potential of Omicron compared to ancestral SARS-CoV-2 spike vaccines against potentially zoonotic coronaviruses","year":2024,"lang":"en","type":"article","venue":"npj Viruses","topic":"SARS-CoV-2 and COVID-19 Research","field":"Medicine","cited_by":5,"is_retracted":false,"has_abstract":true,"ca_institutions":"National Research Council Canada","funders":"National Institute of Allergy and Infectious Diseases; National Institutes of Health; National Research Council Canada; Québec Consortium for Drug Discovery","keywords":"Virology; Vaccination; Antibody; Coronavirus; Pandemic; Neutralizing antibody; Biology; Coronavirus disease 2019 (COVID-19); Antigen; Severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2); Virus; Immunology; Medicine; Disease; Infectious disease (medical specialty)","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0003498301,0.0004624636,0.0008014075,0.0005525884,0.0001641483,0.000248168,0.0004692636,0.0002300583,0.00003718554],"category_scores_gemma":[0.0002566375,0.0004123548,0.0003855943,0.0008343264,0.0002993997,0.000342839,0.000229264,0.0005268778,0.0004446527],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.000258977,"about_ca_system_score_gemma":0.0007631035,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.002270564,"about_ca_topic_score_gemma":0.000435061,"domain_scores_codex":[0.9966878,0.0001048038,0.0007675575,0.0008951437,0.0007779303,0.000766756],"domain_scores_gemma":[0.9985675,0.0001238031,0.0001283753,0.0006495832,0.0004324791,0.00009829572],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.002500499,0.0002939076,0.01244832,0.0005104912,0.0002946644,0.0003172326,0.0004328785,0.00003820696,0.9755069,0.00006050067,0.0008501764,0.006746252],"study_design_scores_gemma":[0.001819167,0.0006177891,0.03848378,0.0005631154,0.0001600481,0.00005713323,0.0001549794,0.0003472474,0.9415669,0.0001230504,0.01571253,0.0003942621],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9942739,0.00111118,0.000740287,0.0001809591,0.001015947,0.001288823,0.0001291964,0.0003420933,0.0009176315],"genre_scores_gemma":[0.9839987,0.00001164487,0.0006307094,0.01448718,0.0006185721,0.00009748951,0.00000916904,0.0001036487,0.00004294981],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.03393998,"threshold_uncertainty_score":0.9998328,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.0816996278483174,"score_gpt":0.3987645904436565,"score_spread":0.3170649625953391,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}