{"id":"W4404631952","doi":"10.1101/2024.11.21.624787","title":"A high-quality phased genome assembly of stinging nettle, <i>Urtica dioica</i> ssp. <i>dioica</i>","year":2024,"lang":"en","type":"preprint","venue":"bioRxiv (Cold Spring Harbor Laboratory)","topic":"Medicinal plant effects and applications","field":"Medicine","cited_by":0,"is_retracted":false,"has_abstract":true,"ca_institutions":"Canada's Michael Smith Genome Sciences Centre; Okanagan University College; University of British Columbia","funders":"","keywords":"Urtica dioica; Urticaceae; Botany; Biology","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0004624449,0.000872314,0.0009694743,0.001326847,0.0006526389,0.0007671589,0.0005807066,0.0005331788,0.00270701],"category_scores_gemma":[0.001597242,0.0005281005,0.001262037,0.001531102,0.0002529214,0.0004257463,0.0006598284,0.001045135,0.002172267],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0005191975,"about_ca_system_score_gemma":0.0008402534,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.003930549,"about_ca_topic_score_gemma":0.005054485,"domain_scores_codex":[0.9996805,0.00005069449,0.00003064454,0.0001346422,0.00006238193,0.00004125389],"domain_scores_gemma":[0.9994323,0.0001508733,0.00009143254,0.00008699728,0.0001628929,0.00007558714],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.0007596215,0.00009279889,0.006049812,0.001083594,0.0001237369,0.0006788711,0.0006781147,0.003865412,0.9505967,0.0005982332,0.003313593,0.03215951],"study_design_scores_gemma":[0.0005502718,0.001277287,0.240956,0.0009562905,0.001268971,0.00239075,0.001252278,0.05758619,0.4962517,0.002056889,0.1950999,0.0003534589],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.6528987,0.002931204,0.2376333,0.0005238426,0.0004264526,0.0008318691,0.09260647,0.005248081,0.006900043],"genre_scores_gemma":[0.4429063,0.001430946,0.3027851,0.0002554253,0.00008394645,0.0007774257,0.2437163,0.002567344,0.005477293],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.003930549,"threshold_uncertainty_score":0.009055853,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.01861157711770064,"score_gpt":0.2680036665733951,"score_spread":0.2493920894556945,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}