{"id":"W4404679132","doi":"10.1101/2024.11.22.624885","title":"Alterations in Circulating T-Cell Subsets with Gut-Homing/Residency Phenotypes Predict HIV-1 Status and Subclinical Atherosclerosis","year":2024,"lang":"en","type":"preprint","venue":"bioRxiv (Cold Spring Harbor Laboratory)","topic":"HIV-related health complications and treatments","field":"Medicine","cited_by":0,"is_retracted":false,"has_abstract":true,"ca_institutions":"Institut Universitaire de Gériatrie de Montréal; Université de Montréal; McGill University Health Centre; Centre Hospitalier de l’Université de Montréal","funders":"Canadian Institutes of Health Research","keywords":"Subclinical infection; Medicine; Human immunodeficiency virus (HIV); Immunology; Internal medicine","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":true,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000130584,0.0002191719,0.0001763879,0.0002786347,0.00027158,0.000461634,0.000112899,0.000207992,0.002006365],"category_scores_gemma":[0.0003484332,0.00009307605,0.00007259864,0.0002585753,0.0001338833,0.00009858912,0.000132948,0.0002843132,0.0001629137],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0001190752,"about_ca_system_score_gemma":0.0001449251,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.00622538,"about_ca_topic_score_gemma":0.00906958,"domain_scores_codex":[0.9999328,0.00001167917,0.000004540179,0.00001797581,0.00001500579,0.00001796796],"domain_scores_gemma":[0.9998919,0.0000199158,0.00002591004,0.000009390529,0.000020135,0.0000327596],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"observational","study_design_scores_codex":[0.0006495258,0.00007300914,0.9617506,0.00002609276,0.00004682376,0.0001146834,0.0001624416,0.0001126415,0.02810437,0.00003821538,0.0001984284,0.008723225],"study_design_scores_gemma":[0.000005103267,0.00006967311,0.9979416,0.000005125298,0.00001919663,0.0002276942,0.0001473915,0.000435727,0.0009661755,0.00003730941,0.0001428572,0.000002147653],"study_design_candidate":"observational","study_design_consensus":"observational","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9993234,0.0001622148,0.00009377142,0.000009488369,0.000002138185,0.000005643562,0.0001309205,0.000003008817,0.0002694115],"genre_scores_gemma":[0.9994788,0.00004718294,0.0001330946,0.000009578395,0.00000373232,0.000004337038,0.0001119651,8.456383e-7,0.0002105471],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.00622538,"threshold_uncertainty_score":0.01237828,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.02161093661713785,"score_gpt":0.269665611878545,"score_spread":0.2480546752614071,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}