{"id":"W4404685124","doi":"10.1101/2024.11.25.625124","title":"Genome-wide association studies identify promising QTL for freezing tolerance in winter and early spring as a basis for in-depth genetic analysis and implementation in winter faba bean ( <i>Vicia faba</i> L.) breeding","year":2024,"lang":"en","type":"preprint","venue":"bioRxiv (Cold Spring Harbor Laboratory)","topic":"Genetic and Environmental Crop Studies","field":"Agricultural and Biological Sciences","cited_by":3,"is_retracted":false,"has_abstract":true,"ca_institutions":"Nordic Life Science Pipeline (Canada)","funders":"","keywords":"Vicia faba; Biology; Spring (device); Quantitative trait locus; Agronomy; Freezing tolerance; Genetics; Gene; Engineering","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0007536603,0.000364648,0.0006355815,0.0001988985,0.0001505095,0.0002679213,0.0001574459,0.0001875717,0.000004709267],"category_scores_gemma":[0.0001891712,0.0002435566,0.0001431146,0.0005076068,0.00005522921,0.0001196262,0.0005318173,0.0002593674,0.000001454279],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0005138257,"about_ca_system_score_gemma":0.00001628798,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0008910032,"about_ca_topic_score_gemma":0.005740031,"domain_scores_codex":[0.9976785,0.00006638226,0.00064975,0.0009092352,0.0002064943,0.000489631],"domain_scores_gemma":[0.9991383,0.0003290664,0.0002877834,0.0000960875,0.00007986442,0.0000689044],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"observational","study_design_scores_codex":[0.00002206671,0.00002380988,0.7950054,0.0002154626,0.0002420003,0.000004238181,0.000298187,0.0000490308,0.2040613,0.000002189808,0.000005806466,0.00007049785],"study_design_scores_gemma":[0.0003637121,0.0001004011,0.9889273,0.0004028395,0.0002690949,8.951363e-9,0.0004929091,0.0001483236,0.008803504,0.00003136543,0.00007463485,0.0003859107],"study_design_candidate":"observational","study_design_consensus":"observational","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9931282,0.004721739,0.000057536,0.0005075225,0.0001723417,0.001267946,0.0001019323,0.00004118219,0.000001586977],"genre_scores_gemma":[0.9970291,0.0007724664,0.001423098,0.0001118232,0.0001477314,0.0004985406,9.779957e-7,0.00001175116,0.000004519156],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.1952578,"threshold_uncertainty_score":0.9931949,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.0177532320641299,"score_gpt":0.2492570153182677,"score_spread":0.2315037832541378,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}