{"id":"W4404696887","doi":"10.1080/19490976.2024.2431167","title":"Transcriptional profiling of zebrafish intestines identifies macrophages as host cells for human norovirus infection","year":2024,"lang":"en","type":"article","venue":"Gut Microbes","topic":"Viral gastroenteritis research and epidemiology","field":"Medicine","cited_by":2,"is_retracted":false,"has_abstract":true,"ca_institutions":"University of Alberta","funders":"Science and Engineering Research Council; Natural Sciences and Engineering Research Council of Canada; European Commission; Vlaamse regering; KU Leuven; Fonds Wetenschappelijk Onderzoek; Alberta Innovates","keywords":"Biology; Norovirus; Zebrafish; Virology; Gene expression profiling; Murine norovirus; Host (biology); Microbiology; Profiling (computer programming); Computational biology; Genetics; Virus; Gene; Gene expression","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002612969,0.000122586,0.0002742138,0.0001887283,0.00007450673,0.00003934071,0.00006285369,0.00006793139,0.0001790448],"category_scores_gemma":[0.0002022777,0.0001065951,0.000186198,0.000105853,0.0001651114,0.0001081217,0.00002804208,0.0001608395,0.00004797858],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00003476005,"about_ca_system_score_gemma":0.00005262039,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0004299241,"about_ca_topic_score_gemma":0.0001344105,"domain_scores_codex":[0.9989867,0.00004716043,0.0003368588,0.0002497094,0.000100153,0.0002794272],"domain_scores_gemma":[0.9995921,0.00005254508,0.00003807904,0.0001050114,0.0001406166,0.00007163812],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.0001321953,0.00007017903,0.005280446,0.001252997,0.00007820837,0.00002377871,0.00008487041,0.000003625489,0.9863789,0.0003445657,0.005565214,0.0007849961],"study_design_scores_gemma":[0.0007907187,0.001208432,0.02513851,0.0007728524,0.00008418143,0.000205395,0.00008181594,0.000122932,0.9635285,0.0009444974,0.007008247,0.0001139864],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9946664,0.001476225,0.001953137,0.0006419243,0.000417655,0.0004365426,0.0001366377,0.00008575357,0.0001857232],"genre_scores_gemma":[0.9954478,0.0002059799,0.001798539,0.0001516258,0.0002992914,0.00005945148,0.0001485676,0.0000233615,0.001865431],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.02285049,"threshold_uncertainty_score":0.4346823,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.03109751880991878,"score_gpt":0.3520679735638301,"score_spread":0.3209704547539113,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}