{"id":"W4405025566","doi":"10.1002/tpg2.20541","title":"Exon disruptive variants in <i>Populus trichocarpa</i> associated with wood properties exhibit distinct gene expression patterns","year":2024,"lang":"en","type":"article","venue":"The Plant Genome","topic":"Bioenergy crop production and management","field":"Agricultural and Biological Sciences","cited_by":1,"is_retracted":false,"has_abstract":true,"ca_institutions":"University of British Columbia; Université Laval","funders":"Natural Sciences and Engineering Research Council of Canada","keywords":"Populus trichocarpa; Biology; Gene; Exon; Genetics; Phenotype; Phenotypic trait; Allele; Copy-number variation; Genome","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001270261,0.0003523184,0.0001964702,0.000577685,0.0001680351,0.0002941298,0.0001978866,0.0002570947,0.0009516643],"category_scores_gemma":[0.0002363676,0.0001296554,0.000321246,0.0005085699,0.000187907,0.0001020477,0.0002447879,0.0003235173,0.000231403],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0001756908,"about_ca_system_score_gemma":0.0001028991,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0006801533,"about_ca_topic_score_gemma":0.001945081,"domain_scores_codex":[0.9998462,0.000018155,0.00001345873,0.00005573405,0.00004076202,0.00002559729],"domain_scores_gemma":[0.9997153,0.0000682207,0.0001477417,0.00002420381,0.00001595393,0.00002850098],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","study_design_scores_codex":[0.0001314205,0.00001969267,0.01379529,0.00008330551,0.00006999583,0.0004174979,0.00004504095,0.0001637803,0.9794769,0.0001340871,0.00007270611,0.005590441],"study_design_scores_gemma":[0.0000254253,0.0001918748,0.7285955,0.00003670262,0.00032476,0.004304247,0.0002123023,0.003187352,0.2544999,0.00043092,0.008151384,0.000039659],"study_design_candidate":"observational","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.996046,0.0004287796,0.001602381,0.00003339754,0.000006280445,0.000007746016,0.001303541,0.00007603613,0.0004958861],"genre_scores_gemma":[0.9952623,0.0002264587,0.001439428,0.00005244542,0.000005681276,0.00001049409,0.002320573,0.00003648502,0.0006461491],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.0009516643,"threshold_uncertainty_score":0.003183663,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.02831088849383881,"score_gpt":0.1890267587311472,"score_spread":0.1607158702373084,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}