{"id":"W4405315712","doi":"10.1016/j.prp.2024.155774","title":"Tumor infiltrating T-cells and loss of expression of SWI/SNF genes in varying stages of clear cell renal cell carcinoma","year":2024,"lang":"en","type":"article","venue":"Pathology - Research and Practice","topic":"Chromatin Remodeling and Cancer","field":"Biochemistry, Genetics and Molecular Biology","cited_by":5,"is_retracted":false,"has_abstract":false,"ca_institutions":"Norfolk General Hospital","funders":"","keywords":"Cancer research; Renal cell carcinoma; Gene; Cell; Clear cell renal cell carcinoma; Biology; Pathology; Medicine; Genetics","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.001437635,0.00008241857,0.0001599859,0.0001001284,0.00004038391,0.00001283108,0.00008631995,0.0001030479,0.00000927488],"category_scores_gemma":[0.0003055774,0.00006797951,0.00002470701,0.0001128247,0.0002388272,0.00001494649,0.0001613166,0.0002301761,4.623509e-7],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.000005328481,"about_ca_system_score_gemma":0.0001253706,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0001270771,"about_ca_topic_score_gemma":0.000007989558,"domain_scores_codex":[0.9986744,0.0004284415,0.0002638568,0.0002785309,0.0001605218,0.0001942287],"domain_scores_gemma":[0.9990432,0.0004799629,0.0001036179,0.0001775217,0.0001483079,0.00004737257],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.0003950573,0.00008108641,0.002824913,0.0007835443,0.00000519999,0.00006791898,0.0005025615,0.00004668784,0.9940405,0.00000841042,0.00006672656,0.001177349],"study_design_scores_gemma":[0.0003509184,0.0007216765,0.0003733022,0.00009663402,0.000009738356,0.00006614005,0.0008014917,0.0003037555,0.9966885,0.00007093948,0.0004511861,0.00006564899],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9848226,0.01354494,0.0001330819,0.00006294889,0.00003466906,0.0001057619,0.00003133721,0.000002499344,0.001262211],"genre_scores_gemma":[0.99431,0.002910783,0.002590562,0.00001166951,0.00004279528,0.000006478806,0.000008202324,0.00001182333,0.000107667],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.01063416,"threshold_uncertainty_score":0.2772124,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.03666543218165849,"score_gpt":0.3521674467907573,"score_spread":0.3155020146090988,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}