{"id":"W4405369590","doi":"10.1128/mra.00585-24","title":"Complete genomes of <i>Salmonella</i> and draft genome of <i>Escherichia</i> isolates from oysters collected in Canada","year":2024,"lang":"en","type":"article","venue":"Microbiology Resource Announcements","topic":"Salmonella and Campylobacter epidemiology","field":"Agricultural and Biological Sciences","cited_by":0,"is_retracted":false,"has_abstract":true,"ca_institutions":"Health Canada","funders":"Health Canada; Government of Canada","keywords":"Salmonella; Escherichia coli; Genome; Biology; Microbiology; Bacteria; Escherichia; Genetics; Gene","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":true,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0004725809,0.001244977,0.001018832,0.002380954,0.001891787,0.001459732,0.001087152,0.0006159762,0.004059393],"category_scores_gemma":[0.00169946,0.0005252481,0.001135652,0.006916364,0.0006126343,0.0004251182,0.0009928959,0.001534035,0.002140786],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.005990319,"about_ca_system_score_gemma":0.02510088,"about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_topic_score_codex":0.7308527,"about_ca_topic_score_gemma":0.8197568,"domain_scores_codex":[0.9993279,0.00001873229,0.00003609791,0.0001428294,0.0002848935,0.0001896828],"domain_scores_gemma":[0.9981151,0.0001264301,0.0001986071,0.0001113654,0.001124702,0.000323757],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","study_design_scores_codex":[0.004195602,0.0002935302,0.0431726,0.004903944,0.0004879266,0.001829964,0.003370949,0.004189964,0.7938033,0.002028284,0.07986392,0.06185991],"study_design_scores_gemma":[0.000214095,0.0003538435,0.5647202,0.0005877585,0.0006798056,0.0009894009,0.002653355,0.00150737,0.05659558,0.0006605833,0.3707742,0.0002639377],"study_design_candidate":"observational","study_design_consensus":null,"genre_codex":"dataset","genre_gemma":"empirical","genre_scores_codex":[0.1488784,0.002937612,0.005614806,0.0005464732,0.0001667356,0.0003350211,0.8328774,0.0008278815,0.007815696],"genre_scores_gemma":[0.07881977,0.002591367,0.01387411,0.0002997251,0.00002843718,0.0002071403,0.8964083,0.0003248295,0.007446371],"genre_candidate":"empirical","genre_consensus":null,"teacher_disagreement_score":0.2691473,"threshold_uncertainty_score":0.5414648,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.01222454029904677,"score_gpt":0.1875794955235375,"score_spread":0.1753549552244907,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}