{"id":"W4405409639","doi":"10.1093/glycob/cwae095","title":"Differential substrate preferences IN ACTINOBACTERIAL protein <i>O</i>-MANNOSYLTRANSFERASES and alteration of protein-<i>O</i>-MANNOSYLATION by choice of secretion pathway","year":2024,"lang":"en","type":"article","venue":"Glycobiology","topic":"Glycosylation and Glycoproteins Research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":1,"is_retracted":false,"has_abstract":true,"ca_institutions":"National Research Council Canada; University of Alberta","funders":"Natural Sciences and Engineering Research Council of Canada","keywords":"Actinobacteria; Corynebacterium glutamicum; Glycosylation; Bacteria; Glycosyltransferase; Secretion; Biochemistry; Biology; Enzyme; Mycobacterium tuberculosis; Microbiology; Chemistry; Genetics; Tuberculosis","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000119145,0.0002175602,0.0001541278,0.00010884,0.00005876271,0.0002621991,0.0001578406,0.0001416078,0.0003291753],"category_scores_gemma":[0.0001476284,0.000110913,0.0001356031,0.0001788036,0.0001328951,0.0001534387,0.0002049934,0.0002649151,0.0001801095],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.000147229,"about_ca_system_score_gemma":0.00009123358,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0003057294,"about_ca_topic_score_gemma":0.0002943927,"domain_scores_codex":[0.9998639,0.00002902992,0.00001335699,0.0000300324,0.00002532091,0.00003846478],"domain_scores_gemma":[0.9998772,0.00002299513,0.00003829758,0.00001409409,0.0000157788,0.00003166583],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.00006874053,0.000006838316,0.0003685741,0.000005947672,0.000001680954,0.00002222435,0.00001057036,0.00002211327,0.9990613,0.00004007719,0.0000059906,0.0003859719],"study_design_scores_gemma":[0.00000404863,0.0001489195,0.01422699,0.000004258186,0.000008962274,0.0002526711,0.00007043916,0.0006695098,0.983732,0.00008384603,0.0007922825,0.000006036999],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9986144,0.0001633865,0.0006325018,0.00001494663,0.000002937339,0.000002553199,0.00009144078,0.000008378543,0.0004693642],"genre_scores_gemma":[0.9983355,0.0001621611,0.0006626546,0.00001707038,0.000001525888,0.000004439824,0.0003135698,0.0000127782,0.0004901718],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.0003291753,"threshold_uncertainty_score":0.001101196,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.01240796957410491,"score_gpt":0.2632170346303701,"score_spread":0.2508090650562652,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}