{"id":"W4405571075","doi":"10.1128/mra.01031-24","title":"Complete genome sequence of <i>Salmonella enterica</i> bacteriophage SeKF_80, isolated from wastewater in British Columbia","year":2024,"lang":"en","type":"article","venue":"Microbiology Resource Announcements","topic":"Bacteriophages and microbial interactions","field":"Environmental Science","cited_by":0,"is_retracted":false,"has_abstract":true,"ca_institutions":"University of British Columbia; Agriculture and Agri-Food Canada","funders":"Agriculture and Agri-Food Canada","keywords":"Salmonella enterica; Bacteriophage; Salmonella; Biology; Genome; Isolation (microbiology); Microbiology; Virology; Whole genome sequencing; Genetics; Bacteria; Escherichia coli; Gene","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":true,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":["metaepi_narrow","insufficient_payload"],"consensus_categories":["insufficient_payload"],"category_scores_codex":[0.0001451439,0.0001917468,0.0003600371,0.0000491475,0.00009944649,0.000208184,0.0004037959,0.0001580474,0.007855439],"category_scores_gemma":[0.000005297649,0.0002629543,0.0001118748,0.0003187978,0.0003536588,0.0002117133,0.0004118661,0.0002823539,0.0008448903],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0002344963,"about_ca_system_score_gemma":0.00001436771,"about_ca_topic_candidate":true,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.02867497,"about_ca_topic_score_gemma":0.01449563,"domain_scores_codex":[0.9980776,0.0001302858,0.0005666594,0.0006647914,0.00006997702,0.0004906521],"domain_scores_gemma":[0.9994554,0.00004000726,0.0001139887,0.0003064304,0.00001195826,0.00007223641],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"not_applicable","study_design_scores_codex":[0.00002657403,0.0001083891,0.009008174,0.00001904646,0.00005786774,0.0001624901,0.0004500239,0.00002559781,0.9855541,7.092921e-8,0.003952774,0.0006349151],"study_design_scores_gemma":[0.0005261365,0.0001885205,0.01889251,0.0002476944,0.00003314448,0.000252646,0.0001541804,0.000124945,0.001693426,0.00001354687,0.9775054,0.0003677948],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9874925,0.00028689,0.0000305863,0.00008014789,0.0003536291,0.00029467,0.01069355,0.00006009422,0.0007079139],"genre_scores_gemma":[0.9877215,0.00008404958,0.0002340892,0.0004758503,0.00004364372,0.00002378098,0.00528688,0.00003793071,0.006092247],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.9838607,"threshold_uncertainty_score":0.9999822,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.01170403092147353,"score_gpt":0.2166333868942348,"score_spread":0.2049293559727612,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}