{"id":"W4405635140","doi":"10.1128/mra.01058-24","title":"Complete genome sequence of <i>Chryseobacterium</i> sp. strain KCF3-3, isolated from the body surface of channel catfish, <i>Ictalurus punctatus</i>","year":2024,"lang":"en","type":"article","venue":"Microbiology Resource Announcements","topic":"Genomics and Phylogenetic Studies","field":"Biochemistry, Genetics and Molecular Biology","cited_by":0,"is_retracted":false,"has_abstract":true,"ca_institutions":"","funders":"Institute of Genetics; JST-Mirai Program; Japan Science and Technology Agency; Ministry of Education, Culture, Sports, Science and Technology","keywords":"Ictalurus; Catfish; Strain (injury); Whole genome sequencing; Open reading frame; Biology; Ictaluridae; Genome; Genetics; Gene; Anatomy; Fish <Actinopterygii>; Fishery; Peptide sequence","routes":{"ca_aff":false,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":true},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000287031,0.0003089531,0.0003910642,0.00003186489,0.0001113542,0.00002344776,0.0005526786,0.0002073791,0.00002631516],"category_scores_gemma":[0.00002036131,0.0002364043,0.0001697405,0.0001726456,0.000492976,0.000002047276,0.000382182,0.0001612294,0.00001467111],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00002183489,"about_ca_system_score_gemma":0.00009638799,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0001959581,"about_ca_topic_score_gemma":0.00004480379,"domain_scores_codex":[0.9982487,0.0001516811,0.0005166829,0.000577138,0.00008420937,0.000421571],"domain_scores_gemma":[0.9990106,0.00006063653,0.000193124,0.0005505242,0.0001330103,0.00005212467],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"not_applicable","study_design_scores_codex":[0.0001270977,0.00005507645,0.001852552,0.00003986718,0.000561445,0.000005294702,0.0005480778,0.0001664003,0.9940491,0.00000900066,0.002498877,0.0000872061],"study_design_scores_gemma":[0.0007441633,0.0007813076,0.001753886,0.00008771289,0.0001463877,0.00004223741,0.0005304837,0.0001009598,0.05824386,0.00007297866,0.9370643,0.0004317222],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9540796,0.009852586,0.000144222,0.0003090309,0.0003401417,0.0003492272,0.03459752,0.000009331608,0.0003183233],"genre_scores_gemma":[0.9887267,0.0006704057,0.0001350153,0.0006117807,0.0001450243,0.00001189185,0.009273481,0.00003584121,0.0003898549],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.9358053,"threshold_uncertainty_score":0.964029,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.0163758059004426,"score_gpt":0.2294542937456681,"score_spread":0.2130784878452255,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}