{"id":"W4405640333","doi":"10.1128/mbio.02559-24","title":"Temperate phage-antibiotic synergy is widespread—extending to <i>Pseudomonas</i> —but varies by phage, host strain, and antibiotic pairing","year":2024,"lang":"en","type":"article","venue":"mBio","topic":"Bacteriophages and microbial interactions","field":"Environmental Science","cited_by":19,"is_retracted":false,"has_abstract":true,"ca_institutions":"McMaster University","funders":"Natural Sciences and Engineering Research Council of Canada; McMaster University","keywords":"Phage therapy; Lysogen; Antibiotics; Temperateness; Microbiology; Biology; Bacteriophage; Host (biology); Lysogenic cycle; Bacteria; Pathogen; Antibiotic resistance; Virology; Genetics; Escherichia coli; Gene","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":["metaepi_narrow","insufficient_payload"],"consensus_categories":["insufficient_payload"],"category_scores_codex":[0.0001651855,0.0002712457,0.0002248072,0.00006931125,0.0003006019,0.0005661025,0.0001905508,0.00009031091,0.002053367],"category_scores_gemma":[0.0000254866,0.0002533796,0.00008022471,0.0003106717,0.0001801154,0.000532839,0.0002690348,0.0002151053,0.001128474],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0001253213,"about_ca_system_score_gemma":0.00001233723,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0009428307,"about_ca_topic_score_gemma":0.00009355578,"domain_scores_codex":[0.998448,0.00004096988,0.0002643687,0.0006352367,0.0001452714,0.0004662104],"domain_scores_gemma":[0.9994312,0.00007462393,0.000040253,0.0002467847,0.000008088658,0.0001990517],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.000008953733,0.00005070861,0.0003562257,0.00004653941,0.00004012444,0.00006611706,0.0005497817,0.00001026889,0.9636854,0.00005100643,0.02473802,0.01039689],"study_design_scores_gemma":[0.0002933067,0.0002223699,0.01689058,0.0004521779,0.0001072653,0.0002646772,0.0004224631,0.000473165,0.8699216,0.00004480743,0.1101935,0.0007140754],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9921091,0.0008356704,0.0006244309,0.00144054,0.0008477208,0.0002567387,0.0003402938,0.0001939792,0.003351477],"genre_scores_gemma":[0.9871603,0.0001681929,0.0005842078,0.001877678,0.00007557062,0.000002863618,0.00002216621,0.00004587293,0.01006316],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.09376372,"threshold_uncertainty_score":0.9999918,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.00799935552547663,"score_gpt":0.2352827179759227,"score_spread":0.2272833624504461,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}