{"id":"W4405707085","doi":"10.22456/1679-9216.129530","title":"Phylogenetic Classification of Feline Immunodeficiency Virus","year":2023,"lang":"en","type":"article","venue":"ACTA SCIENTIAE VETERINARIAE","topic":"HIV Research and Treatment","field":"Immunology and Microbiology","cited_by":4,"is_retracted":false,"has_abstract":true,"ca_institutions":"","funders":"","keywords":"Feline immunodeficiency virus; Virology; Phylogenetic tree; Biology; Phylogenetics; Human immunodeficiency virus (HIV); Medicine; Genetics; Viral disease; Lentivirus; Gene","routes":{"ca_aff":false,"ca_fund":false,"ca_venue":false,"about_ca":true,"invisible_to_affiliation_only":true},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.0003955022,0.0001157868,0.0001658339,0.0002856168,0.0002073743,0.00001971901,0.0003436094,0.00009377024,0.0006122952],"category_scores_gemma":[0.00008501128,0.00009702351,0.00007853081,0.0007492969,0.0003070866,0.0000666715,0.0001702659,0.0001011827,0.00387268],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00002851805,"about_ca_system_score_gemma":0.0000752161,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.00009967965,"about_ca_topic_score_gemma":0.000009840634,"domain_scores_codex":[0.998812,0.0001161882,0.0002529856,0.0003113881,0.00008768954,0.000419707],"domain_scores_gemma":[0.9992751,0.00007354096,0.00008990025,0.000447174,0.000087211,0.0000270051],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","study_design_scores_codex":[0.00005983918,0.0001612742,0.001148769,0.00001253676,0.00005333046,0.000007154031,0.0001710322,0.000002984197,0.9883679,0.0001238787,0.002343024,0.007548322],"study_design_scores_gemma":[0.002371116,0.001559907,0.5727494,0.00004111109,0.00005484429,0.00008701724,0.0003933804,0.0001405162,0.2855394,0.0001746222,0.1365663,0.000322435],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.996869,0.0006226783,0.00005334761,0.0002474946,0.0005851951,0.0002023525,0.0001622021,0.00008506807,0.001172721],"genre_scores_gemma":[0.9972786,0.0001416833,0.00005693639,0.00001061438,0.00001078555,0.00003525931,0.0004371929,0.0000105467,0.002018427],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.7028284,"threshold_uncertainty_score":0.9969029,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.04624967489215849,"score_gpt":0.3083565107037363,"score_spread":0.2621068358115778,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}