{"id":"W4405841210","doi":"10.1128/mra.01203-24","title":"Culture collection containing 1,240 isolates from healthy Canadian laying hens","year":2024,"lang":"en","type":"article","venue":"Microbiology Resource Announcements","topic":"Gut microbiota and health","field":"Biochemistry, Genetics and Molecular Biology","cited_by":2,"is_retracted":false,"has_abstract":true,"ca_institutions":"McGill University","funders":"Egg Farmers of Canada; Ministère de l'Agriculture, des Pêcheries et de l'Alimentation; McGill University","keywords":"Microbiome; Feces; Biology; Gut microbiome; Zoology; Microbiology; Bioinformatics","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":true,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0008364899,0.001652477,0.001279397,0.002303266,0.00313069,0.001253862,0.001058347,0.0008348997,0.003226527],"category_scores_gemma":[0.001534411,0.0004448625,0.0006144271,0.0038189,0.0007257025,0.0004137243,0.001425485,0.001004662,0.003066108],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.002704833,"about_ca_system_score_gemma":0.01221348,"about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_topic_score_codex":0.6039776,"about_ca_topic_score_gemma":0.6976124,"domain_scores_codex":[0.9982784,0.00006532187,0.0001493491,0.0003515355,0.0007849303,0.0003704687],"domain_scores_gemma":[0.9982882,0.0001241598,0.00008601169,0.0001015903,0.001094972,0.0003049775],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"not_applicable","study_design_scores_codex":[0.002039749,0.001081409,0.0747399,0.00187649,0.0001945922,0.002172443,0.002556192,0.0008595763,0.8139964,0.0007016293,0.04278393,0.05699769],"study_design_scores_gemma":[0.0004334188,0.002430258,0.5234264,0.0007794875,0.0006307894,0.002948731,0.004060013,0.002027337,0.1404154,0.0002210347,0.3223317,0.0002954386],"study_design_candidate":"not_applicable","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"dataset","genre_scores_codex":[0.6467007,0.006973561,0.01727782,0.002237569,0.0009382354,0.01423047,0.2664016,0.0009107854,0.04432922],"genre_scores_gemma":[0.3847212,0.01237909,0.09862547,0.003176891,0.0007585388,0.005801115,0.4282483,0.0004507831,0.06583861],"genre_candidate":"dataset","genre_consensus":null,"teacher_disagreement_score":0.3960224,"threshold_uncertainty_score":0.7967094,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.0107346130653303,"score_gpt":0.2569742301773762,"score_spread":0.2462396171120459,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}