{"id":"W4405924637","doi":"10.1111/ele.70031","title":"Central Taxa Are Keystone Microbes During Early Succession","year":2024,"lang":"en","type":"letter","venue":"Ecology Letters","topic":"Gut microbiota and health","field":"Biochemistry, Genetics and Molecular Biology","cited_by":25,"is_retracted":false,"has_abstract":true,"ca_institutions":"University of Toronto","funders":"University of Miami; Genomics Center, University of Minnesota; U.S. Department of Agriculture; National Institute of Food and Agriculture; National Science Foundation","keywords":"Microbiome; Biodiversity; Biology; Taxon; Ecology; Ecosystem; Keystone species; Ecological succession; Metagenomics; Microbial ecology; Evolutionary biology; Bacteria; Paleontology; Bioinformatics","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.001414454,0.0002670669,0.0003320843,0.0002216982,0.001834273,0.00162292,0.0005291427,0.008602602,0.004248103],"category_scores_gemma":[0.007749799,0.0002564435,0.0002011677,0.0002031947,0.002676938,0.001275861,0.0008498321,0.007963019,0.004041537],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00156594,"about_ca_system_score_gemma":0.0007910105,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.00135016,"about_ca_topic_score_gemma":0.002809193,"domain_scores_codex":[0.9989961,0.0003403012,0.00006056178,0.0002487434,0.0002138335,0.0001403581],"domain_scores_gemma":[0.9953138,0.002633844,0.0003792279,0.0003943162,0.0005368866,0.0007420059],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"not_applicable","study_design_gemma":"observational","study_design_scores_codex":[0.0006280499,0.00007251198,0.008013801,0.0002589713,0.00003587451,0.005779233,0.0007227104,0.0003383482,0.01056021,0.02013252,0.7915515,0.1619062],"study_design_scores_gemma":[0.0001427792,0.0001519486,0.006666839,0.0002045503,0.00002647641,0.006797375,0.0006763997,0.001239802,0.005161676,0.04691757,0.9319682,0.00004634717],"study_design_candidate":"observational","study_design_consensus":null,"genre_codex":"commentary","genre_gemma":"empirical","genre_scores_codex":[0.01594314,0.006470262,0.00326317,0.9411151,0.01654457,0.00002894149,0.0001331025,0.0002663769,0.01623542],"genre_scores_gemma":[0.2356531,0.007434633,0.003594615,0.6908537,0.02993171,0.0001089631,0.00011297,0.0001100703,0.03220016],"genre_candidate":"empirical","genre_consensus":null,"teacher_disagreement_score":0.008602602,"threshold_uncertainty_score":0.01421136,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.005019541463884247,"score_gpt":0.2203403643765561,"score_spread":0.2153208229126719,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}