{"id":"W4405939932","doi":"10.21203/rs.3.rs-5686297/v1","title":"Persistent mirusvirus infection in the marine protist Aurantiochytrium","year":2024,"lang":"en","type":"preprint","venue":"Research Square","topic":"Protist diversity and phylogeny","field":"Biochemistry, Genetics and Molecular Biology","cited_by":7,"is_retracted":false,"has_abstract":false,"ca_institutions":"Dalhousie University","funders":"Natural Sciences and Engineering Research Council of Canada; Dalhousie University; Gordon and Betty Moore Foundation","keywords":"Protist; Fishery; Oceanography; Biology; Geography; Geology; Gene; Genetics","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.001585955,0.0001987616,0.0001629126,0.0002264081,0.0001841709,0.0001892069,0.0005336247,0.0004245973,0.00006735756],"category_scores_gemma":[0.0001786316,0.0001598546,0.0002898035,0.0003074447,0.0001678886,0.000001963798,0.002856239,0.001565579,0.0001606701],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00009840744,"about_ca_system_score_gemma":0.0002959349,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.00234848,"about_ca_topic_score_gemma":0.001804211,"domain_scores_codex":[0.997596,0.0005929176,0.0001854608,0.0006195596,0.000567082,0.0004390357],"domain_scores_gemma":[0.998975,0.00003125302,0.00003898068,0.000674817,0.0002126374,0.00006730983],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"observational","study_design_scores_codex":[0.001997835,0.002197397,0.7852754,0.01835189,0.00139259,0.001098945,0.003645997,0.001453297,0.04393817,0.004813785,0.1113443,0.02449039],"study_design_scores_gemma":[0.001646493,0.002452074,0.8071778,0.001435162,0.0001527197,0.0001420242,0.0009801073,0.000512879,0.02284027,0.01707434,0.1441628,0.00142341],"study_design_candidate":"observational","study_design_consensus":"observational","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9834925,0.002383555,0.00001828931,0.001168288,0.0003818222,0.002122948,0.0001800804,0.00001998764,0.01023255],"genre_scores_gemma":[0.9956636,0.001234444,0.00003754354,0.00006676935,0.0005148374,0.0004043259,0.0005869059,0.00002298552,0.001468607],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.03281843,"threshold_uncertainty_score":0.6801748,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.05224883057175179,"score_gpt":0.3600405591014255,"score_spread":0.3077917285296737,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}