{"id":"W4406025912","doi":"10.3390/plants14010124","title":"A High-Quality Phased Genome Assembly of Stinging Nettle (Urtica dioica ssp. dioica)","year":2025,"lang":"en","type":"article","venue":"Plants","topic":"Medicinal plant effects and applications","field":"Medicine","cited_by":5,"is_retracted":false,"has_abstract":true,"ca_institutions":"Canada's Michael Smith Genome Sciences Centre; University of British Columbia","funders":"Natural Sciences and Engineering Research Council of Canada; Queens College, City University of New York; Alliance de recherche numérique du Canada","keywords":"Urtica dioica; Contig; Genome; Biology; Genetics; Sequence assembly; Haplotype; Gene; Evolutionary biology; Transcriptome; Botany; Genotype","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000474476,0.0008684877,0.0009337212,0.001297747,0.000708373,0.0006984816,0.0005471021,0.000555093,0.002549684],"category_scores_gemma":[0.001695241,0.0005317595,0.001288223,0.001566933,0.0002423245,0.0004683881,0.0006407299,0.001154358,0.002277864],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0005075693,"about_ca_system_score_gemma":0.001010436,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.004074292,"about_ca_topic_score_gemma":0.006049936,"domain_scores_codex":[0.9996476,0.00005213088,0.00003698262,0.0001500444,0.00007159347,0.00004158547],"domain_scores_gemma":[0.999469,0.000132709,0.0000786106,0.00009239688,0.0001640712,0.0000632604],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.0005926401,0.00009038586,0.005381573,0.001034547,0.000109256,0.0006766326,0.0007325966,0.003421773,0.9445775,0.000714382,0.002942807,0.03972597],"study_design_scores_gemma":[0.0004948352,0.001162791,0.2250868,0.0007658162,0.001250619,0.00258831,0.001051889,0.05161595,0.4949561,0.002362221,0.2183366,0.0003279822],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.5759458,0.002951807,0.3303933,0.0005719322,0.0004304236,0.001039823,0.0746185,0.004850435,0.00919794],"genre_scores_gemma":[0.3424399,0.001686296,0.445836,0.0002541387,0.00007202714,0.001037513,0.1996549,0.002502082,0.006517048],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.004074292,"threshold_uncertainty_score":0.008529544,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.02570139300882718,"score_gpt":0.3368383978434062,"score_spread":0.3111370048345791,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}