{"id":"W4406056338","doi":"10.1371/journal.pone.0316727","title":"PtpA protein from Mycobacterium avium subsp. paratuberculosis as a potential marker of rheumatoid arthritis in humans","year":2025,"lang":"en","type":"article","venue":"PLoS ONE","topic":"Mycobacterium research and diagnosis","field":"Medicine","cited_by":3,"is_retracted":false,"has_abstract":true,"ca_institutions":"University of British Columbia","funders":"Universidad de Guadalajara","keywords":"Mycobacterium avium subspecies paratuberculosis; Paratuberculosis; Immunology; Rheumatoid arthritis; Immune system; Antibody; Biology; Medicine; Mycobacterium; Pathology","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0004999411,0.0002430166,0.000244435,0.0009635056,0.0002278553,0.0004705054,0.0001692304,0.0003773662,0.0009817217],"category_scores_gemma":[0.001006671,0.000160907,0.0001115722,0.0006685912,0.0002424789,0.0001568848,0.0002279407,0.0003089124,0.0002163529],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0001011066,"about_ca_system_score_gemma":0.00008741343,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0007560026,"about_ca_topic_score_gemma":0.0004182371,"domain_scores_codex":[0.9997168,0.0001129554,0.00001825256,0.00006138112,0.0000634336,0.00002714174],"domain_scores_gemma":[0.999604,0.00009698717,0.0001625553,0.00002716564,0.00004708924,0.00006226019],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.001080211,0.0001660595,0.9485558,0.0001295358,0.0001141711,0.0009613055,0.0002578749,0.00006247235,0.03122753,0.00007196781,0.0002708115,0.01710218],"study_design_scores_gemma":[0.00001211425,0.0007688354,0.9931648,0.00001546151,0.00006127113,0.003398202,0.0001268776,0.0002539298,0.001232302,0.00005668398,0.0009050977,0.000004287368],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9952639,0.003195651,0.0004669134,0.00006355155,0.00001118246,0.00001089257,0.00008943388,0.0000147406,0.0008838137],"genre_scores_gemma":[0.9990895,0.0003947482,0.0002245022,0.00002165088,0.00001506025,0.000004394878,0.00005659338,0.000001170814,0.0001924297],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.0009817217,"threshold_uncertainty_score":0.003284156,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.01757577052870322,"score_gpt":0.251721436708239,"score_spread":0.2341456661795357,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}