{"id":"W4406071510","doi":"10.1101/2025.01.04.631305","title":"Tripartite loops reverse antibiotic resistance","year":2025,"lang":"en","type":"preprint","venue":"bioRxiv (Cold Spring Harbor Laboratory)","topic":"Antibiotic Resistance in Bacteria","field":"Biochemistry, Genetics and Molecular Biology","cited_by":2,"is_retracted":false,"has_abstract":true,"ca_institutions":"Concordia University","funders":"","keywords":"Antibiotic resistance; Resistance (ecology); Antibiotics; Microbiology; Biology; Ecology","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002446768,0.0003833583,0.0003475447,0.0002351183,0.0002129208,0.0006286933,0.0004320574,0.0006251828,0.003915794],"category_scores_gemma":[0.0007576376,0.0001901251,0.0003014188,0.0001426889,0.0005360586,0.0005325809,0.0007003816,0.00120632,0.0009190413],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0004046283,"about_ca_system_score_gemma":0.0002234807,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0001979791,"about_ca_topic_score_gemma":0.0002377438,"domain_scores_codex":[0.9997016,0.00005976946,0.00001685774,0.00007564832,0.00009311587,0.0000531068],"domain_scores_gemma":[0.9993229,0.0001879118,0.0002010756,0.0001333458,0.00006443681,0.00009030367],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.0001106504,0.00007137928,0.0003632055,0.0001123363,0.00002099117,0.00006492207,0.00002783426,0.001256888,0.98416,0.002718278,0.0003910834,0.01070233],"study_design_scores_gemma":[0.00003897543,0.0009350876,0.001755304,0.00002639948,0.00004204619,0.0006402397,0.00004238724,0.0122996,0.9632082,0.00320862,0.01776876,0.00003444326],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9319019,0.003202543,0.05334237,0.0007582498,0.0003125505,0.00009460878,0.0003611374,0.001057427,0.008969292],"genre_scores_gemma":[0.984472,0.0004309709,0.01176601,0.0003524221,0.00003030061,0.00004410016,0.0001537168,0.00008907695,0.002661398],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.003915794,"threshold_uncertainty_score":0.01309961,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.009589862296878545,"score_gpt":0.2290153026034272,"score_spread":0.2194254403065487,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}