{"id":"W4406143174","doi":"10.1016/j.vetmic.2025.110377","title":"Bayesian estimation of diagnostic accuracy of fecal smears, fecal PCR and serum ELISA for detecting Mycobacterium avium subsp. paratuberculosis infections in four domestic ruminant species in Saudi Arabia","year":2025,"lang":"en","type":"article","venue":"Veterinary Microbiology","topic":"Mycobacterium research and diagnosis","field":"Medicine","cited_by":5,"is_retracted":false,"has_abstract":false,"ca_institutions":"Université de Montréal; Cegep de Saint Hyacinthe","funders":"Taif University; Dairy Farmers of Canada","keywords":"Paratuberculosis; Feces; Biology; Veterinary medicine; Mycobacterium avium subsp. paratuberculosis; Population; Ruminant; Gold standard (test); Mycobacterium; Microbiology; Internal medicine; Pasture; Medicine; Ecology","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00693948,0.0005248684,0.0004874808,0.001486621,0.0004904769,0.001040233,0.0009623657,0.0008493108,0.0007352932],"category_scores_gemma":[0.02084629,0.0005141586,0.0006404577,0.0003403255,0.0006168695,0.0005659833,0.0006873535,0.0005828336,0.0001750125],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.001200995,"about_ca_system_score_gemma":0.0007849385,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.02034317,"about_ca_topic_score_gemma":0.01524926,"domain_scores_codex":[0.9981389,0.001002864,0.0001854686,0.0003044585,0.0002052296,0.000162947],"domain_scores_gemma":[0.9776589,0.01803485,0.001731273,0.0005571969,0.001666052,0.0003516597],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"observational","study_design_scores_codex":[0.001157793,0.0001713064,0.8856429,0.00009135112,0.0005343438,0.0001929208,0.0005152455,0.06423418,0.004110421,0.0007697332,0.0002966833,0.04228323],"study_design_scores_gemma":[0.00007954865,0.0003461927,0.4691491,0.00008588873,0.0003681928,0.0003635248,0.0005436954,0.5244314,0.00245512,0.001698045,0.0004139103,0.00006524636],"study_design_candidate":"observational","study_design_consensus":"observational","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9933788,0.0003078249,0.005755414,0.0001091562,0.000004641443,0.00001201756,0.0001075608,0.00001455861,0.0003100513],"genre_scores_gemma":[0.9973641,0.00007728641,0.002266957,0.00001422146,0.000004555836,0.000004994668,0.0001840686,0.000001889809,0.00008188943],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.02034317,"threshold_uncertainty_score":0.04044956,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.0238154998088342,"score_gpt":0.3161847154735363,"score_spread":0.2923692156647021,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}