{"id":"W4406143174","doi":"10.1016/j.vetmic.2025.110377","title":"Bayesian estimation of diagnostic accuracy of fecal smears, fecal PCR and serum ELISA for detecting Mycobacterium avium subsp. paratuberculosis infections in four domestic ruminant species in Saudi Arabia","year":2025,"lang":"en","type":"article","venue":"Veterinary Microbiology","topic":"Mycobacterium research and diagnosis","field":"Medicine","cited_by":5,"is_retracted":false,"has_abstract":false,"ca_institutions":"Université de Montréal; Cegep de Saint Hyacinthe","funders":"Taif University; Dairy Farmers of Canada","keywords":"Paratuberculosis; Feces; Biology; Veterinary medicine; Mycobacterium avium subsp. paratuberculosis; Population; Ruminant; Gold standard (test); Mycobacterium; Microbiology; Internal medicine; Pasture; Medicine; Ecology","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0004454978,0.0002341021,0.0006966178,0.0006684578,0.00006256186,0.00001642947,0.0001054311,0.00023854,0.00004723833],"category_scores_gemma":[0.004395802,0.0002213677,0.000113722,0.0005270186,0.0002404834,0.0001239249,0.0001608249,0.0002702356,0.000002487877],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0001386688,"about_ca_system_score_gemma":0.0001676727,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0002586164,"about_ca_topic_score_gemma":0.0003213967,"domain_scores_codex":[0.9981157,0.0002390017,0.0006965071,0.0003992284,0.00005847767,0.00049108],"domain_scores_gemma":[0.9954193,0.003947579,0.0001707781,0.0002684365,0.0001054941,0.00008842359],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","study_design_scores_codex":[0.0008144368,0.0003550968,0.3780759,0.001512078,0.00005652657,0.00008953166,0.0001495525,0.00004842695,0.6149044,0.00004073319,0.0001102617,0.003843089],"study_design_scores_gemma":[0.003128308,0.003641579,0.9519608,0.001400394,0.0001064138,0.0007784191,0.0001114929,0.001136486,0.03688478,0.0001706877,0.0004566748,0.0002239466],"study_design_candidate":"observational","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9964532,0.0004620031,0.0009357376,0.0005919897,0.0002534522,0.001052413,0.000184333,0.00002003576,0.00004678707],"genre_scores_gemma":[0.9979783,0.0006459174,0.0009300045,0.00005235669,0.00003837725,0.0002092675,0.00009452784,0.00001753991,0.00003369924],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.5780196,"threshold_uncertainty_score":0.9027111,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.0238154998088342,"score_gpt":0.3161847154735363,"score_spread":0.2923692156647021,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}