{"id":"W4406438417","doi":"10.1038/s41597-024-04289-7","title":"Time series data on typhoid fever incidence during outbreaks from 2000 to 2022","year":2025,"lang":"en","type":"article","venue":"Scientific Data","topic":"Salmonella and Campylobacter epidemiology","field":"Agricultural and Biological Sciences","cited_by":2,"is_retracted":false,"has_abstract":true,"ca_institutions":"Public Health Ontario; University of Toronto","funders":"Bill and Melinda Gates Foundation","keywords":"Typhoid fever; Outbreak; Incidence (geometry); Paratyphoid fever; Virology; Series (stratigraphy); Medicine; Geography; Biology; Mathematics","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.001282324,0.0005428396,0.0005911191,0.005217497,0.0002204377,0.0007943306,0.0006045008,0.0006445914,0.003972345],"category_scores_gemma":[0.009052655,0.0002300584,0.0007839286,0.009257752,0.0002118195,0.0005056529,0.0007562872,0.0006387313,0.001640715],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0008228344,"about_ca_system_score_gemma":0.001246134,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.02051343,"about_ca_topic_score_gemma":0.01682633,"domain_scores_codex":[0.998799,0.0002365732,0.0003313526,0.0002452888,0.0002698707,0.0001178176],"domain_scores_gemma":[0.9947544,0.002334507,0.00147205,0.000426594,0.0008261045,0.0001863138],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"observational","study_design_scores_codex":[0.001280796,0.0003537656,0.5606041,0.006889454,0.001318302,0.0008714008,0.0007411269,0.03215877,0.002688179,0.003330261,0.3026021,0.08716176],"study_design_scores_gemma":[0.0001668226,0.000289161,0.731081,0.001040458,0.0003713973,0.0007157248,0.0008899656,0.009178541,0.00196354,0.00185836,0.2523361,0.0001088295],"study_design_candidate":"observational","study_design_consensus":"observational","genre_codex":"dataset","genre_gemma":"dataset","genre_scores_codex":[0.04665676,0.0007160914,0.0009095936,0.0002216137,0.00005811386,0.00006793421,0.9497679,0.0001579328,0.001444005],"genre_scores_gemma":[0.08278586,0.0006906877,0.002187267,0.00008489056,0.00004334504,0.0003093139,0.9131747,0.00002762208,0.0006962934],"genre_candidate":"dataset","genre_consensus":"dataset","teacher_disagreement_score":0.02051343,"threshold_uncertainty_score":0.04078805,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.04188160905348035,"score_gpt":0.276759450897694,"score_spread":0.2348778418442137,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}