{"id":"W4406845031","doi":"10.1038/s43587-025-00807-3","title":"Transposable element methylation tracks age","year":2025,"lang":"en","type":"article","venue":"Nature Aging","topic":"RNA modifications and cancer","field":"Biochemistry, Genetics and Molecular Biology","cited_by":1,"is_retracted":false,"has_abstract":false,"ca_institutions":"Cargill (Canada)","funders":"Hungarian Science Foundation","keywords":"Transposable element; Element (criminal law); Methylation; DNA Transposable Elements; DNA methylation; Biology; Genetics; Computational biology; Evolutionary biology; Genome; Political science; Gene; Gene expression","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00009761876,0.00005939727,0.00005033656,0.00003294295,0.00006357997,0.00001753688,0.00008434269,0.000131058,0.00001852871],"category_scores_gemma":[0.000009332393,0.00005637694,0.00004206084,0.00009913142,0.00001211425,0.000002251185,0.00001042033,0.0001277207,0.00000189325],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00001368914,"about_ca_system_score_gemma":0.00003201191,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.000005555944,"about_ca_topic_score_gemma":0.00002591849,"domain_scores_codex":[0.9995754,0.00001607902,0.00008433688,0.0001691641,0.00005526928,0.00009976934],"domain_scores_gemma":[0.9997532,0.000003049445,0.0000197687,0.0001733897,0.00003468913,0.00001583909],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.00002230384,0.00003567058,0.001682711,0.00002623627,0.00006217468,0.00000179982,0.0000626159,0.0002887005,0.9545951,0.004173917,0.008502741,0.03054597],"study_design_scores_gemma":[0.0002984298,0.00001650916,0.004660876,0.00001638859,0.00002215944,5.368811e-7,0.00004562332,0.0001109468,0.505254,0.0004562032,0.4890249,0.00009339132],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.8134211,0.02558169,0.07900128,0.003739566,0.0009047426,0.0005014717,0.00002677552,0.00006024819,0.07676313],"genre_scores_gemma":[0.9936742,0.0001507622,0.001025198,0.0007901036,0.00009181035,0.00001845633,0.00009770387,0.000005459719,0.004146303],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.4805222,"threshold_uncertainty_score":0.2298985,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.004814815802292468,"score_gpt":0.2871224225153279,"score_spread":0.2823076067130354,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}