{"id":"W4406854264","doi":"10.1139/gen-2024-0114","title":"Whole genome sequencing and analysis of benzo(a)pyrene-degrading bacteria <i>Bacillus cereus</i> M72-4","year":2025,"lang":"en","type":"article","venue":"Genome","topic":"Polyamine Metabolism and Applications","field":"Biochemistry, Genetics and Molecular Biology","cited_by":4,"is_retracted":false,"has_abstract":true,"ca_institutions":"","funders":"Natural Science Foundation of Xinjiang Province","keywords":"Bacillus cereus; Pyrene; Biology; Dioxygenase; Genome; Gene; Bacteria; Food science; Biochemistry; Genetics","routes":{"ca_aff":false,"ca_fund":false,"ca_venue":true,"about_ca":false,"invisible_to_affiliation_only":true},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002614066,0.00104331,0.00126088,0.00146072,0.0007876926,0.0007129639,0.0004887638,0.0007548059,0.001283476],"category_scores_gemma":[0.000574142,0.0003693168,0.001466676,0.003406133,0.0002152591,0.0004057642,0.0004686599,0.0008133053,0.001047907],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0005114977,"about_ca_system_score_gemma":0.0008798523,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.01043281,"about_ca_topic_score_gemma":0.007637666,"domain_scores_codex":[0.9995275,0.00003252909,0.00004503109,0.0001599362,0.0001483457,0.00008670472],"domain_scores_gemma":[0.9996448,0.00004804954,0.0001034656,0.0000289816,0.0001191998,0.0000555508],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.0008421689,0.0001804294,0.006034032,0.0008384413,0.0001006579,0.0005779233,0.0003091593,0.0008659707,0.9714466,0.0001666602,0.001646426,0.01699156],"study_design_scores_gemma":[0.0004239663,0.001750664,0.604986,0.0004007037,0.001396216,0.003486279,0.001481417,0.01088902,0.2900116,0.0006438079,0.08422568,0.0003046419],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.8736557,0.004522561,0.009687743,0.0005399801,0.0001641091,0.0003352005,0.1057976,0.0007700915,0.004526919],"genre_scores_gemma":[0.6760536,0.004507032,0.04049101,0.000441702,0.00008468991,0.0005691318,0.2698341,0.0006253289,0.007393393],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.01043281,"threshold_uncertainty_score":0.02074414,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.009097893646893914,"score_gpt":0.2393536688545374,"score_spread":0.2302557752076435,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}