{"id":"W4406926042","doi":"10.1186/s40168-024-02007-4","title":"Gardnerella vaginalis-binding IgA in the urethra of sexually experienced males","year":2025,"lang":"en","type":"article","venue":"Microbiome","topic":"Reproductive tract infections research","field":"Immunology and Microbiology","cited_by":2,"is_retracted":false,"has_abstract":true,"ca_institutions":"Toronto General Hospital; University Health Network; Western University; University of Toronto","funders":"National Institute of Diabetes and Digestive and Kidney Diseases","keywords":"Gardnerella vaginalis; Biology; Medical microbiology; Urethra; Urethritis; Sexual behavior; Bacterial vaginosis; Microbiology; Immunology; Zoology; Internal medicine; Clinical psychology; Medicine","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0007414397,0.0001304942,0.0002258773,0.0004660042,0.0001363836,0.00002144265,0.0004618931,0.0001508621,0.0003665067],"category_scores_gemma":[0.00014612,0.00009620253,0.00006390607,0.0008655796,0.0005233934,0.00007208002,0.0001058485,0.0003629782,0.0001990594],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00006391457,"about_ca_system_score_gemma":0.0001018243,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0001699214,"about_ca_topic_score_gemma":0.00003174425,"domain_scores_codex":[0.9986758,0.0003475992,0.0002928737,0.0003242181,0.00003462216,0.0003249357],"domain_scores_gemma":[0.9991188,0.0002217558,0.00006518702,0.0004937914,0.00009395931,0.000006478816],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.00006892541,0.0001586887,0.008809381,0.00003439913,0.00006165439,0.000004146195,0.002373053,0.000004445074,0.9837282,0.001342825,0.002356452,0.00105784],"study_design_scores_gemma":[0.0007248194,0.0001269642,0.02089395,0.00006272633,0.00001410356,0.00008868297,0.00425386,3.566722e-7,0.925982,0.0001935032,0.04752833,0.000130718],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9908568,0.001491225,0.00009788988,0.0007436767,0.000435395,0.000328995,0.0000198117,0.0000253544,0.006000801],"genre_scores_gemma":[0.9940364,0.00003429642,0.00008988625,0.00007629861,0.00001157695,0.00004812847,0.00003644996,0.000007638801,0.005659266],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.05774621,"threshold_uncertainty_score":0.4012991,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.01970117255115758,"score_gpt":0.3262184295780071,"score_spread":0.3065172570268496,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}