{"id":"W4407014414","doi":"10.1139/gen-2024-0096","title":"The repetitive DNA landscape in the <i>brizantha</i> agamic complex of <i>Urochloa</i> P. Beauv.","year":2025,"lang":"en","type":"article","venue":"Genome","topic":"Chromosomal and Genetic Variations","field":"Agricultural and Biological Sciences","cited_by":0,"is_retracted":false,"has_abstract":true,"ca_institutions":"","funders":"Fundação Oswaldo Cruz; Fundação de Amparo à Pesquisa do Estado de Minas Gerais; Conselho Nacional de Desenvolvimento Científico e Tecnológico; Coordenação de Aperfeiçoamento de Pessoal de Nível Superior","keywords":"Biology; Retrotransposon; Ploidy; Genome; Repeated sequence; Interspersed repeat; Satellite DNA; Centromere; Genus; Botany; Evolutionary biology; Chromosome; Genetics; Transposable element; Gene","routes":{"ca_aff":false,"ca_fund":false,"ca_venue":true,"about_ca":false,"invisible_to_affiliation_only":true},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00006395362,0.0001477176,0.0001346446,0.001006434,0.0002692121,0.0002470496,0.0001521998,0.0002223165,0.0006276153],"category_scores_gemma":[0.0001279145,0.0001321416,0.0001691207,0.0005196448,0.0001997786,0.0001877457,0.0002643848,0.0002158669,0.000151877],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0001776353,"about_ca_system_score_gemma":0.0001213911,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.00411354,"about_ca_topic_score_gemma":0.006257816,"domain_scores_codex":[0.9999397,0.000004520758,0.000003600429,0.00002976738,0.0000099197,0.00001251301],"domain_scores_gemma":[0.9998535,0.00002110152,0.00006753059,0.000007668732,0.00002404541,0.00002604589],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","study_design_scores_codex":[0.00006916571,0.000006935167,0.01343083,0.0000412148,0.00001025859,0.00007002107,0.0002381249,0.00004001226,0.9831444,0.00003128569,0.00001357475,0.002904178],"study_design_scores_gemma":[0.000004733371,0.0001044332,0.98318,0.00001185508,0.00002530217,0.0004213798,0.0003297494,0.0002752378,0.01447455,0.00004011909,0.001124895,0.000007780638],"study_design_candidate":"observational","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9986507,0.0002120993,0.0004023178,0.000008516658,0.000001206764,0.000006658677,0.0002683834,0.00001017906,0.0004398299],"genre_scores_gemma":[0.9974838,0.0001386923,0.0009264074,0.00003497752,0.000002719083,0.00001648464,0.0008081964,0.000007208602,0.0005813462],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.00411354,"threshold_uncertainty_score":0.008179188,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.01221647341851923,"score_gpt":0.2127000971728817,"score_spread":0.2004836237543625,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}