{"id":"W4407111702","doi":"10.3389/fviro.2025.1547176","title":"Effects of GS-CA1 on nuclear envelope-associated early HIV-1 infection steps","year":2025,"lang":"en","type":"article","venue":"Frontiers in Virology","topic":"Nuclear Structure and Function","field":"Biochemistry, Genetics and Molecular Biology","cited_by":0,"is_retracted":false,"has_abstract":true,"ca_institutions":"Centre hospitalier de l'Université Laval; Centre hospitalier universitaire de Québec; Université du Québec à Trois-Rivières","funders":"Mitacs; Fonds de recherche du Québec – Nature et technologies; Canadian Foundation for AIDS Research","keywords":"Human immunodeficiency virus (HIV); Envelope (radar); Virology; Nuclear engineering; Medicine; Computer science; Engineering","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00008724772,0.000112669,0.0001930222,0.0001516749,0.00003957661,0.000005197737,0.00009002608,0.0003374063,0.000008970851],"category_scores_gemma":[0.0001142305,0.0001153515,0.000061985,0.0001479618,0.00007874824,0.000003260643,0.00005044809,0.0001499805,0.00000886508],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00003384805,"about_ca_system_score_gemma":0.00002208226,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.00004755871,"about_ca_topic_score_gemma":0.00001595735,"domain_scores_codex":[0.9992446,0.0001164563,0.0001639222,0.0002470773,0.00005374369,0.000174222],"domain_scores_gemma":[0.9996976,0.00001310949,0.0000735502,0.0001674346,0.00002646751,0.00002181095],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"observational","study_design_scores_codex":[0.002064464,0.0003693255,0.460799,0.0001221335,0.0004851655,0.00001348075,0.0002310585,0.0003054132,0.4063258,0.00123203,0.1096231,0.01842909],"study_design_scores_gemma":[0.001643193,0.0009166881,0.9307133,0.00002723042,0.00004409864,0.000001269619,0.00001732561,0.0001147438,0.02205704,0.0005413637,0.04377804,0.0001456819],"study_design_candidate":"observational","study_design_consensus":"observational","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.994076,0.000143453,0.001696991,0.00008752872,0.00145576,0.0001613497,0.00000383365,0.00001488991,0.002360154],"genre_scores_gemma":[0.9982661,0.0001152697,0.0004316694,0.0005355427,0.00005093898,0.000007878382,0.00002302139,0.00001515964,0.0005543939],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.4699143,"threshold_uncertainty_score":0.4703899,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.001568374427296245,"score_gpt":0.1850598216723919,"score_spread":0.1834914472450956,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}