{"id":"W4407137754","doi":"10.2196/56519","title":"Real-World Effectiveness of COVID-19 Vaccines (ChAdOx-1s, CoronaVac, BBIBP-CorV, mRNA-1273, and BNT162b2) in Jakarta: Protocol for Test-Negative Design of Health Care Data","year":2025,"lang":"en","type":"article","venue":"JMIR Research Protocols","topic":"SARS-CoV-2 and COVID-19 Research","field":"Medicine","cited_by":0,"is_retracted":false,"has_abstract":true,"ca_institutions":"","funders":"","keywords":"Coronavirus disease 2019 (COVID-19); Preprint; Protocol (science); Test (biology); Health care; Severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2); 2019-20 coronavirus outbreak; Medicine; Family medicine; Computer science; World Wide Web; Virology; Alternative medicine; Disease","routes":{"ca_aff":false,"ca_fund":false,"ca_venue":true,"about_ca":false,"invisible_to_affiliation_only":true},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.08718881,0.003187216,0.003244626,0.003193621,0.002693125,0.002581205,0.002745787,0.003438519,0.02096471],"category_scores_gemma":[0.1173465,0.001974155,0.006358661,0.003593678,0.003269694,0.002258263,0.003154546,0.003354072,0.003750619],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.005520823,"about_ca_system_score_gemma":0.01461789,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.003100335,"about_ca_topic_score_gemma":0.002425825,"domain_scores_codex":[0.919685,0.05979147,0.009493263,0.003918144,0.004672944,0.002439146],"domain_scores_gemma":[0.9098942,0.03259459,0.01854156,0.01593031,0.02000643,0.003032853],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"randomized_trial","study_design_gemma":"observational","study_design_scores_codex":[0.5717711,0.02732133,0.07344006,0.03716512,0.009825867,0.001104989,0.005086387,0.01623353,0.005285413,0.02211495,0.1159134,0.1147378],"study_design_scores_gemma":[0.3626952,0.1393424,0.1842138,0.01427853,0.006779836,0.0004466188,0.002053385,0.01448197,0.01270582,0.01560248,0.2464459,0.0009539833],"study_design_candidate":"observational","study_design_consensus":null,"genre_codex":"protocol","genre_gemma":"protocol","genre_scores_codex":[0.0154565,0.0002825395,0.004722545,0.0003415581,0.0002412308,0.9617792,0.01486095,0.0001017201,0.002213885],"genre_scores_gemma":[0.008981282,0.00006437434,0.003612685,0.0001060044,0.00002167775,0.9856403,0.001326539,0.00001139186,0.0002357742],"genre_candidate":"protocol","genre_consensus":"protocol","teacher_disagreement_score":0.08718881,"threshold_uncertainty_score":0.461104,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.3588083838609964,"score_gpt":0.6166235019568371,"score_spread":0.2578151180958407,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}