{"id":"W4407192154","doi":"10.1016/j.tim.2024.12.012","title":"Diversity in women and their vaginal microbiota","year":2025,"lang":"en","type":"review","venue":"Trends in Microbiology","topic":"Reproductive tract infections research","field":"Immunology and Microbiology","cited_by":26,"is_retracted":false,"has_abstract":true,"ca_institutions":"Canadian Institute for Advanced Research; University of New Brunswick","funders":"H2020 European Research Council; Biocodex Microbiota Foundation; Universiteit Antwerpen; National Institutes of Health; VLIRUOS; National Institute of General Medical Sciences; Engineering Research Centers; Ministerio de Ciencia e Innovación; Fonds Wetenschappelijk Onderzoek; Agencia Estatal de Investigación; Fondation Mérieux; Ministerio de Ciencia, Innovación y Universidades","keywords":"Biology; Diversity (politics); Microbiome; Vaginal flora; Evolutionary biology; Bacterial vaginosis; Ecology; Computational biology; Microbiology; Genetics","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0009086622,0.0006249344,0.002262123,0.003194591,0.0003008827,0.0000131469,0.0006841279,0.001281479,0.0008079446],"category_scores_gemma":[0.0001238514,0.000506575,0.0002278972,0.001443188,0.0007946758,0.00006824948,0.002431404,0.001956529,0.0001891178],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0007136633,"about_ca_system_score_gemma":0.0002431436,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0003461072,"about_ca_topic_score_gemma":0.0003213514,"domain_scores_codex":[0.9955808,0.001469419,0.0007008667,0.001226068,0.00001146803,0.001011393],"domain_scores_gemma":[0.9983879,0.0006568529,0.0001916632,0.0006894693,0.00004614887,0.00002791666],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"design_other","study_design_gemma":"not_applicable","study_design_scores_codex":[0.00007906332,0.0003300036,0.0006770836,0.001873906,0.0003492462,0.00002361257,0.001061381,2.963517e-7,0.003194018,0.00007181284,0.001960159,0.9903794],"study_design_scores_gemma":[0.0009395674,0.0001337544,0.0007386103,0.00173521,0.0000461881,0.0005529885,0.00007704125,2.248537e-8,0.00007897992,0.0001075832,0.9951437,0.0004463271],"study_design_candidate":"not_applicable","study_design_consensus":null,"genre_codex":"review","genre_gemma":"review","genre_scores_codex":[0.007214173,0.9898137,0.000002133132,0.000066093,0.0006825856,0.0004503334,0.0003389303,0.00004648274,0.001385524],"genre_scores_gemma":[0.002252058,0.989989,0.00001384021,0.00003850356,0.00002632942,0.0001382431,0.000551725,0.00002695896,0.006963301],"genre_candidate":"review","genre_consensus":"review","teacher_disagreement_score":0.9931836,"threshold_uncertainty_score":0.9997386,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.04601443959593642,"score_gpt":0.3455687994748123,"score_spread":0.2995543598788759,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}