{"id":"W4407224180","doi":"10.7554/elife.99062.2.sa3","title":"eLife Assessment: Soluble immune mediators orchestrate protective in vitro granulomatous responses across Mycobacterium tuberculosis complex lineages","year":2025,"lang":"en","type":"peer-review","venue":"","topic":"Tuberculosis Research and Epidemiology","field":"Medicine","cited_by":0,"is_retracted":false,"has_abstract":true,"ca_institutions":"Iogen Corporation","funders":"Schweizerischer Nationalfonds zur Förderung der Wissenschaftlichen Forschung; National Science Foundation","keywords":"Mycobacterium tuberculosis; Immune system; Immunology; In vitro; Tuberculosis; Biology; Microbiology; Mycobacterium tuberculosis complex; Medicine; Genetics; Pathology","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.002558632,0.0003184389,0.0004404066,0.001274246,0.0004290878,0.001672499,0.0004122704,0.0004853483,0.006906166],"category_scores_gemma":[0.003788346,0.0001991227,0.0002046987,0.0007891178,0.0005284207,0.00082773,0.0009420288,0.0004972137,0.003546126],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0004287541,"about_ca_system_score_gemma":0.0009920346,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0004249071,"about_ca_topic_score_gemma":0.001181513,"domain_scores_codex":[0.9976366,0.0005578239,0.0001915276,0.00027253,0.001089932,0.0002516551],"domain_scores_gemma":[0.9970356,0.000616469,0.0005046999,0.0001721404,0.001416933,0.0002541943],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"not_applicable","study_design_scores_codex":[0.001184579,0.0001554565,0.02533202,0.001578043,0.00009378226,0.0008658045,0.001057763,0.00040129,0.7718242,0.001168072,0.00869651,0.1876425],"study_design_scores_gemma":[0.0001216921,0.0007821317,0.0746135,0.0002442349,0.0001627983,0.001487733,0.001819944,0.002908911,0.7684578,0.00159052,0.1477525,0.00005830334],"study_design_candidate":"not_applicable","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"other","genre_scores_codex":[0.8895105,0.02422266,0.03313431,0.006463971,0.001215764,0.001020065,0.004656016,0.001293748,0.03848299],"genre_scores_gemma":[0.920059,0.00853766,0.03413108,0.001055009,0.0004877492,0.000375604,0.00230637,0.0002381424,0.03280933],"genre_candidate":"other","genre_consensus":null,"teacher_disagreement_score":0.006906166,"threshold_uncertainty_score":0.02310336,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.05537925063534672,"score_gpt":0.4153128531558986,"score_spread":0.3599336025205518,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}