{"id":"W4407251492","doi":"10.1371/journal.pone.0315583","title":"Genomic characterization of foodborne Salmonella enterica and Escherichia coli isolates from Saboba district and Bolgatanga Municipality Ghana","year":2025,"lang":"en","type":"article","venue":"PLoS ONE","topic":"Salmonella and Campylobacter epidemiology","field":"Agricultural and Biological Sciences","cited_by":5,"is_retracted":false,"has_abstract":true,"ca_institutions":"University of Guelph","funders":"Department of Health and Social Care; Bill and Melinda Gates Foundation","keywords":"Salmonella enterica; Salmonella; Escherichia coli; Microbiology; Biology; Serotype; Genetics; Gene; Bacteria","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001702434,0.0004833111,0.0003733179,0.001506159,0.0005428352,0.0006024813,0.0002265521,0.0003987812,0.001247597],"category_scores_gemma":[0.0007406715,0.000244381,0.0002521043,0.002216834,0.0004914068,0.0002498942,0.0005071239,0.0002910524,0.0003356349],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0004362238,"about_ca_system_score_gemma":0.0005505809,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.01984036,"about_ca_topic_score_gemma":0.02640682,"domain_scores_codex":[0.9997482,0.00003480959,0.00003074304,0.00007836088,0.00004873623,0.0000591495],"domain_scores_gemma":[0.999559,0.00006516826,0.0001901127,0.0000199706,0.00009474559,0.00007103538],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"observational","study_design_scores_codex":[0.0003847356,0.0001481812,0.8081805,0.0006241921,0.0000569681,0.003830801,0.009130653,0.0002590282,0.1585701,0.00009772401,0.0005837504,0.01813335],"study_design_scores_gemma":[0.00001368072,0.0001730906,0.981757,0.00006750406,0.00003160832,0.002206808,0.008533633,0.00009224818,0.002843205,0.00002878816,0.004244165,0.000008169491],"study_design_candidate":"observational","study_design_consensus":"observational","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9958078,0.0005560844,0.0002307109,0.00008422697,0.000006898912,0.00005980332,0.002615833,0.000007658117,0.0006310378],"genre_scores_gemma":[0.989903,0.001288815,0.001467833,0.0001201677,0.00001161264,0.00009476649,0.006084152,0.00001138345,0.001018429],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.01984036,"threshold_uncertainty_score":0.03944975,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.03289012679552897,"score_gpt":0.2144074363047598,"score_spread":0.1815173095092308,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}