{"id":"W4407285687","doi":"10.1093/jcag/gwae059.164","title":"A164 SINGLE-CELL RNASEQ INDICATES INCREASE IN COLONIC REGULATORY MACROPHAGES DURING <i>CITROBACTER RODENTIUM</i> INFECTIOUS COLITIS","year":2025,"lang":"en","type":"article","venue":"Journal of the Canadian Association of Gastroenterology","topic":"Microscopic Colitis","field":"Medicine","cited_by":0,"is_retracted":false,"has_abstract":true,"ca_institutions":"University of Calgary","funders":"","keywords":"Citrobacter rodentium; Citrobacter; Colitis; Microbiology; Biology; Immunology; Enterobacteriaceae; Gene; Escherichia coli; Genetics","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002080639,0.0003032936,0.0002882226,0.0003736415,0.000147185,0.0002918942,0.0001137309,0.0004081361,0.002443862],"category_scores_gemma":[0.0001314275,0.0001458758,0.0002109396,0.0002029101,0.0002773357,0.0002313491,0.0001633234,0.0006811779,0.0004897472],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0001514602,"about_ca_system_score_gemma":0.0001101746,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.00020006,"about_ca_topic_score_gemma":0.0002823655,"domain_scores_codex":[0.9997546,0.00002916755,0.00002219016,0.00006908138,0.00004503011,0.00007990372],"domain_scores_gemma":[0.999755,0.00003621777,0.00007105141,0.00002516644,0.00004477119,0.00006776404],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.0002266514,0.00001795029,0.0004286725,0.00002425876,0.000002132501,0.00002733819,0.00001333348,0.000008409268,0.9987326,0.00001103934,0.00003084736,0.0004767001],"study_design_scores_gemma":[0.0000301705,0.001028179,0.03259551,0.00001397626,0.00002251356,0.0004505125,0.0001568052,0.0004223444,0.9636642,0.00006151319,0.001547114,0.000007128544],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9920682,0.001353313,0.003176384,0.0001618399,0.00005564058,0.00004498367,0.001542418,0.0001603943,0.001436919],"genre_scores_gemma":[0.9892322,0.0005987166,0.004330458,0.000214737,0.00002978473,0.0001294334,0.001589072,0.00004422238,0.003831324],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.002443862,"threshold_uncertainty_score":0.008175492,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.003244121092191425,"score_gpt":0.2044302180669871,"score_spread":0.2011860969747956,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}