{"id":"W4407410399","doi":"10.3390/microorganisms13020400","title":"Molecular Epidemiology of Salmonella enterica Serotype Dublin Isolated from 2011 to 2022 from Veal and Dairy Cattle in Pennsylvania","year":2025,"lang":"en","type":"article","venue":"Microorganisms","topic":"Salmonella and Campylobacter epidemiology","field":"Agricultural and Biological Sciences","cited_by":3,"is_retracted":false,"has_abstract":true,"ca_institutions":"","funders":"Pennsylvania Department of Agriculture; Pennsylvania State University; University of Pennsylvania","keywords":"Salmonella enterica; Biology; Salmonella; Serotype; Antibiotic resistance; Ceftiofur; Virulence; Ampicillin; Microbiology; Plasmid; Enrofloxacin; Multiple drug resistance; Virology; Veterinary medicine; Drug resistance; Gene; Genetics; Antibiotics; Medicine; Ciprofloxacin; Bacteria","routes":{"ca_aff":false,"ca_fund":false,"ca_venue":false,"about_ca":true,"invisible_to_affiliation_only":true},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0004833669,0.000206,0.0001607169,0.001496659,0.0004800732,0.000607362,0.0004135195,0.0004636004,0.0005490091],"category_scores_gemma":[0.0009090789,0.000222815,0.0001813972,0.0008435039,0.0005037332,0.0003257351,0.0006381816,0.0003017721,0.0001050278],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.001247329,"about_ca_system_score_gemma":0.0006239862,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.04114258,"about_ca_topic_score_gemma":0.06523143,"domain_scores_codex":[0.9994499,0.0001011964,0.0000518129,0.0001615893,0.0001195244,0.0001159313],"domain_scores_gemma":[0.9992203,0.000146336,0.0002543034,0.00002185779,0.0001946791,0.0001626262],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"observational","study_design_scores_codex":[0.0000678412,0.00003016321,0.9922787,0.00002642708,0.00002128729,0.0002789112,0.0004202794,0.0001770457,0.003792321,0.00002639423,0.0001759593,0.002704683],"study_design_scores_gemma":[0.000002888969,0.0001575169,0.9955183,0.0000283142,0.00001434555,0.0008699989,0.001776775,0.0003239987,0.0005878424,0.00001387628,0.0007004431,0.000005697895],"study_design_candidate":"observational","study_design_consensus":"observational","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9991319,0.00009100053,0.00008783064,0.00003610139,0.000002442226,0.00001161099,0.0003714695,0.000002924234,0.0002647674],"genre_scores_gemma":[0.9982261,0.0001549785,0.0003781837,0.00005524158,0.000003819317,0.00001378801,0.001030473,0.000001727794,0.0001356416],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.04114258,"threshold_uncertainty_score":0.08180624,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.01479691628815314,"score_gpt":0.2443473624535458,"score_spread":0.2295504461653926,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}