{"id":"W4407699356","doi":"10.1080/22221751.2025.2469643","title":"Neuraminidase reassortment and oseltamivir resistance in clade 2.3.4.4b A(H5N1) viruses circulating among Canadian poultry, 2024","year":2025,"lang":"en","type":"article","venue":"Emerging Microbes & Infections","topic":"Animal Virus Infections Studies","field":"Agricultural and Biological Sciences","cited_by":29,"is_retracted":false,"has_abstract":true,"ca_institutions":"University of Guelph; Ministry of Agriculture; University of Saskatchewan; University of Manitoba; Public Health Agency of Canada; Canadian Food Inspection Agency","funders":"Defence Research and Development Canada; Public Health Agency of Canada; Canadian Food Inspection Agency","keywords":"Reassortment; Influenza A virus subtype H5N1; Oseltamivir; Neuraminidase; Clade; Virology; Neuraminidase inhibitor; Biology; Microbiology; Virus; Gene; Coronavirus disease 2019 (COVID-19); Genetics; Phylogenetics; Medicine; Internal medicine","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":true,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002069674,0.0003187949,0.0001947262,0.0005071727,0.001203118,0.0005395748,0.0003658514,0.0005214812,0.0007095247],"category_scores_gemma":[0.0005136149,0.0001764533,0.0001857068,0.0003898881,0.0004774209,0.0001363598,0.0002043989,0.0003315621,0.0001342097],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.002439227,"about_ca_system_score_gemma":0.001794367,"about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_topic_score_codex":0.5450179,"about_ca_topic_score_gemma":0.583546,"domain_scores_codex":[0.9996207,0.00002258284,0.00001655199,0.00008827393,0.0001421491,0.0001097012],"domain_scores_gemma":[0.9997206,0.00002708857,0.00007920795,0.00001684011,0.00009506776,0.00006112473],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"observational","study_design_scores_codex":[0.0004416296,0.0001265756,0.8535986,0.0000412604,0.00005669589,0.001098799,0.001652271,0.0001554231,0.1371621,0.00008958355,0.0002767427,0.005300366],"study_design_scores_gemma":[0.000008692283,0.0001860072,0.9916971,0.000006603256,0.00002303183,0.001167496,0.0009416552,0.0002388507,0.004918844,0.0000193933,0.0007832719,0.000009000284],"study_design_candidate":"observational","study_design_consensus":"observational","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9992986,0.0001063004,0.0000436562,0.00001778925,0.000002657499,0.000009102825,0.0001557934,0.000001961379,0.0003641333],"genre_scores_gemma":[0.9989309,0.00007482729,0.0001551552,0.00003639446,0.000001851659,0.000005267246,0.0003660429,0.000001511557,0.0004279453],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.4549821,"threshold_uncertainty_score":0.9153231,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.01129389271568537,"score_gpt":0.2397976421791952,"score_spread":0.2285037494635099,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}