{"id":"W4407850479","doi":"","title":"Sequencing of ESBL E. coli from manure across four countries reveals high prevalence in all regions but distinct resistance patterns","year":2024,"lang":"en","type":"article","venue":"HAL (Le Centre pour la Communication Scientifique Directe)","topic":"Pharmaceutical and Antibiotic Environmental Impacts","field":"Environmental Science","cited_by":0,"is_retracted":false,"has_abstract":true,"ca_institutions":"University of Guelph","funders":"","keywords":"Resistance (ecology); Manure; Biology; Geography; Agronomy","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.001146971,0.0006814455,0.0006698421,0.001752881,0.0005217805,0.001458021,0.0003615692,0.0009978494,0.001306999],"category_scores_gemma":[0.002345678,0.000228801,0.0005029665,0.003401392,0.0007765612,0.0004920655,0.0008421956,0.0003822444,0.0003430149],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0004055218,"about_ca_system_score_gemma":0.0008077199,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.008978477,"about_ca_topic_score_gemma":0.008360391,"domain_scores_codex":[0.9990544,0.0001911629,0.0001243495,0.0002687345,0.0001558554,0.0002054561],"domain_scores_gemma":[0.997707,0.0004881154,0.0007146869,0.0001821797,0.0007546324,0.0001532996],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"observational","study_design_scores_codex":[0.001091769,0.0001115581,0.8777018,0.000512823,0.0003344138,0.0008083913,0.003079175,0.0007438987,0.07166952,0.0001903464,0.0009380772,0.04281821],"study_design_scores_gemma":[0.00001020385,0.0002054712,0.9849183,0.0001323969,0.0001205976,0.0007044839,0.004768322,0.0001125854,0.005092421,0.00009229368,0.0038255,0.00001756896],"study_design_candidate":"observational","study_design_consensus":"observational","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9908084,0.0009530559,0.001142278,0.000306861,0.00002551488,0.00002602198,0.005019094,0.00003330688,0.001685446],"genre_scores_gemma":[0.9928473,0.0009305723,0.001459318,0.0002500801,0.00001124916,0.00002212284,0.003848277,0.00001766157,0.0006134182],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.008978477,"threshold_uncertainty_score":0.01785243,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.02950334578180169,"score_gpt":0.2703061085573541,"score_spread":0.2408027627755524,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}