{"id":"W4407921090","doi":"10.1093/nar/gkaf120","title":"Protein bL38 facilitates incorporation of uL6 during assembly of the 50S subunit in <i>Flavobacterium johnsoniae</i>","year":2025,"lang":"en","type":"article","venue":"Nucleic Acids Research","topic":"Genomics and Phylogenetic Studies","field":"Biochemistry, Genetics and Molecular Biology","cited_by":1,"is_retracted":false,"has_abstract":true,"ca_institutions":"Canada's Michael Smith Genome Sciences Centre; University of British Columbia; McGill University","funders":"National Institute of General Medical Sciences; Canada Foundation for Innovation; University of British Columbia; McGill University; National Institutes of Health; National Science Foundation","keywords":"50S; Biology; Ribosomal protein; Operon; Protein subunit; Ribosome biogenesis; Ribosomal RNA; Biogenesis; Ribosome; Gene; Cell biology; Molecular biology; Biochemistry; RNA; Mutant","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001100327,0.0002432326,0.0002154776,0.00009414814,0.0001847173,0.0001981904,0.0001906548,0.0001733525,0.0005458949],"category_scores_gemma":[0.0001560826,0.0001254114,0.0001883578,0.00008384271,0.0001534942,0.0001660616,0.0002567725,0.0002686121,0.0004132219],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0004865644,"about_ca_system_score_gemma":0.0001662577,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.003167686,"about_ca_topic_score_gemma":0.002319074,"domain_scores_codex":[0.9998921,0.0000162391,0.000008564441,0.00002553945,0.00002859247,0.0000289286],"domain_scores_gemma":[0.9999114,0.00001361011,0.00003147669,0.00001246663,0.00000877544,0.00002218369],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.00003444938,0.000006216808,0.0002140001,0.00001060653,0.000001074789,0.00002971544,0.00001752805,0.00003814749,0.9993324,0.00001822109,0.00001308701,0.0002845836],"study_design_scores_gemma":[0.00000358908,0.00007094255,0.007995527,0.000004387618,0.000005232514,0.0001225937,0.00004992217,0.0008821894,0.9895108,0.00002808277,0.001321665,0.000005090599],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9983192,0.0002181188,0.0009067291,0.00003392724,0.000004234058,0.000003918131,0.000123088,0.00005749103,0.0003332103],"genre_scores_gemma":[0.9964802,0.00009961939,0.001988365,0.00002644007,0.000002634451,0.000006696046,0.0003637579,0.00003855962,0.0009937464],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.003167686,"threshold_uncertainty_score":0.006298482,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.02202344326395919,"score_gpt":0.2922944478358174,"score_spread":0.2702710045718583,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}