{"id":"W4408163692","doi":"10.4236/ojmm.2025.151002","title":"Clinical Isolate of <i>Candida tropicalis</i> from a Patient in North Carolina: Identification, Whole-Genome Sequence Analysis, and Anticandidal Activity of <i>Ganoderma lucidum</i>","year":2025,"lang":"en","type":"article","venue":"Open Journal of Medical Microbiology","topic":"Fungal Biology and Applications","field":"Medicine","cited_by":0,"is_retracted":false,"has_abstract":true,"ca_institutions":"Hillsborough Hospital","funders":"National Human Genome Research Institute; Directorate for Biological Sciences","keywords":"Candida tropicalis; Ganoderma lucidum; Identification (biology); Whole genome sequencing; Biology; Ganoderma; Genetics; Genome; Gene; Microbiology; Antifungal; Food science; Botany","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00007062627,0.0005189657,0.0003954259,0.00066049,0.001081681,0.0005756176,0.0004709081,0.0006937849,0.0008753017],"category_scores_gemma":[0.0004094744,0.0002516245,0.0003232787,0.0006752573,0.0003908404,0.0002080764,0.0004057035,0.001075784,0.0003259746],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0008779634,"about_ca_system_score_gemma":0.001073516,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.06420368,"about_ca_topic_score_gemma":0.08108769,"domain_scores_codex":[0.9997444,0.00001884331,0.00001938662,0.00007007818,0.00008172399,0.00006555363],"domain_scores_gemma":[0.9997374,0.00004486829,0.00004364855,0.00001038099,0.00007036526,0.00009333144],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"case_report","study_design_gemma":"observational","study_design_scores_codex":[0.0009295829,0.0008648641,0.1850026,0.0005479907,0.00009890023,0.4684083,0.007144805,0.000627877,0.3088309,0.0004133119,0.006345253,0.0207856],"study_design_scores_gemma":[0.00007529286,0.001812788,0.6964881,0.0003065801,0.0002529323,0.2113057,0.01761941,0.001713236,0.05687882,0.0002030799,0.01320349,0.0001406204],"study_design_candidate":"observational","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9942848,0.0004263662,0.0004517885,0.0009494449,0.0000522862,0.0001364691,0.0008286563,0.00001778399,0.002852362],"genre_scores_gemma":[0.9947104,0.0006381186,0.0009653644,0.000786367,0.00004091871,0.00002287816,0.0006218167,0.00001292695,0.00220119],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.06420368,"threshold_uncertainty_score":0.1276599,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.01681019512301253,"score_gpt":0.3142412071826787,"score_spread":0.2974310120596662,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}