{"id":"W4408225285","doi":"10.1016/j.ejop.2025.126140","title":"Phylogeny, morphology, and ultrastructure of sessilid peritrich ciliates in termite guts, Termitophrya africana and Doliophrys denislynni gen. nov., sp. nov.","year":2025,"lang":"en","type":"article","venue":"European Journal of Protistology","topic":"Protist diversity and phylogeny","field":"Biochemistry, Genetics and Molecular Biology","cited_by":0,"is_retracted":false,"has_abstract":true,"ca_institutions":"University of Guelph","funders":"Freie Universität Berlin; Max-Planck-Gesellschaft","keywords":"Biology; Ultrastructure; Phylogenetics; Taxonomy (biology); Morphology (biology); Zoology; Botany","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0004847476,0.0002083317,0.0004201097,0.0002615412,0.00007835993,0.00001759133,0.000357802,0.0001326509,0.00001422754],"category_scores_gemma":[0.0001757155,0.0001935853,0.00008065343,0.0001787312,0.0004840634,0.00001056377,0.0002565331,0.0003142738,0.000001171492],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00001622776,"about_ca_system_score_gemma":0.0000969832,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.00001598439,"about_ca_topic_score_gemma":0.00002619671,"domain_scores_codex":[0.9983445,0.0004749839,0.0005088713,0.0003203028,0.00009008383,0.0002612522],"domain_scores_gemma":[0.9991575,0.00003505527,0.000349594,0.0002204377,0.0001418422,0.00009550052],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","study_design_scores_codex":[0.0003946092,0.00007252033,0.448151,0.0001345018,0.0001163231,0.00051942,0.0001945731,0.00001271586,0.5438911,0.0001350894,0.0004941033,0.005884015],"study_design_scores_gemma":[0.001929913,0.0006844761,0.9529718,0.00007523153,0.00006992492,0.002317354,0.000164541,0.000004582173,0.0391371,0.0002360864,0.002204453,0.0002045664],"study_design_candidate":"observational","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9924408,0.005203348,0.0005887538,0.0002276784,0.000215482,0.000230352,0.00004507639,0.000003345286,0.00104522],"genre_scores_gemma":[0.9965127,0.0005758293,0.002451496,0.0001917978,0.0001015636,0.000002085151,0.000008982493,0.00001452414,0.0001410921],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.5048208,"threshold_uncertainty_score":0.7894181,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.004832890990711517,"score_gpt":0.2182603989559353,"score_spread":0.2134275079652238,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}