{"id":"W4408309473","doi":"10.1007/s42832-025-0294-2","title":"Distinct responses of rare and abundant microbial taxa to long-term soil acidification","year":2025,"lang":"en","type":"article","venue":"Soil Ecology Letters","topic":"Microbial Community Ecology and Physiology","field":"Environmental Science","cited_by":4,"is_retracted":false,"has_abstract":false,"ca_institutions":"Ministry of Agriculture","funders":"","keywords":"Ocean acidification; Soil acidification; Taxon; Term (time); Biology; Ecology; Environmental chemistry; Soil pH; Chemistry; Soil water; Climate change","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000257627,0.000133479,0.0002335888,0.00008784739,0.0002755885,0.000007849052,0.000321776,0.0001417953,0.0008709426],"category_scores_gemma":[0.0001197968,0.0001369223,0.0000468458,0.0001717917,0.0007046371,0.0000575389,0.0004136947,0.0002034737,0.0001360511],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0001033262,"about_ca_system_score_gemma":0.00002558412,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.000276395,"about_ca_topic_score_gemma":0.01375586,"domain_scores_codex":[0.9987969,0.0003726503,0.0002379777,0.0002852429,0.0000372216,0.0002700329],"domain_scores_gemma":[0.9992058,0.000306342,0.00009901068,0.0003290301,0.000009172323,0.00005065662],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","study_design_scores_codex":[0.0002291947,0.00007373809,0.4281227,0.00001905978,0.00002767873,0.000006628445,0.0002954817,0.00006296895,0.5599093,0.00003778359,0.01051117,0.0007043066],"study_design_scores_gemma":[0.0003438497,0.0001084154,0.9838468,0.00001089252,0.0000280685,0.00001007297,0.00001911834,0.000006789031,0.01456922,0.0001147784,0.0008234438,0.000118584],"study_design_candidate":"observational","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9907442,0.00001159236,0.0001427528,0.008075119,0.0002778512,0.0002193191,0.00002117401,0.0000218417,0.0004861111],"genre_scores_gemma":[0.9933771,0.00001001381,0.0001386726,0.005969334,0.00001659727,0.00001888654,0.00003621481,0.000006818736,0.0004263598],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.5557241,"threshold_uncertainty_score":0.9536211,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.008310370210051246,"score_gpt":0.2381486750658148,"score_spread":0.2298383048557635,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}