{"id":"W4408382361","doi":"10.1111/iej.14218","title":"Microbiota associated with caries and apical periodontitis: A next‐generation sequencing study","year":2025,"lang":"en","type":"article","venue":"International Endodontic Journal","topic":"Oral microbiology and periodontitis research","field":"Dentistry","cited_by":10,"is_retracted":false,"has_abstract":true,"ca_institutions":"Western University","funders":"National Research Foundation of Korea","keywords":"Biofilm; Periodontitis; Biology; Root canal; Microbiology; Proteobacteria; Fusobacterium nucleatum; Dentistry; 16S ribosomal RNA; Bacteria; Medicine; Genetics; Porphyromonas gingivalis","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0005128726,0.0001740625,0.0002583808,0.0002722164,0.0004368472,0.0008931936,0.0003123232,0.0001210288,0.0005033975],"category_scores_gemma":[0.0004645917,0.000144801,0.00006925296,0.0001706071,0.0001913214,0.0003984446,0.0001335483,0.00061121,0.00002471334],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0003270871,"about_ca_system_score_gemma":0.000268015,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0003744088,"about_ca_topic_score_gemma":0.004599205,"domain_scores_codex":[0.9985084,0.0002622474,0.0003841913,0.0002944255,0.0002629237,0.0002878095],"domain_scores_gemma":[0.9991322,0.0001207834,0.000129112,0.0001290912,0.0004098994,0.00007895501],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"observational","study_design_scores_codex":[0.0002795515,0.0003588253,0.8542075,0.00001260723,0.001476858,0.001439241,0.001000341,0.0000507025,0.131739,0.001246259,0.004947963,0.003241146],"study_design_scores_gemma":[0.008111775,0.0006930314,0.9650678,0.000522145,0.0002518788,0.006380304,0.003908759,0.0020762,0.003754225,0.0003506968,0.008296953,0.0005862038],"study_design_candidate":"observational","study_design_consensus":"observational","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9942269,0.000592804,0.001181188,0.0006517469,0.001622928,0.0002125373,0.0000364008,0.0000318447,0.001443662],"genre_scores_gemma":[0.9932764,0.00005311572,0.0003267316,0.0001841174,0.0002770698,0.00001243576,0.00003867961,0.00001369812,0.005817721],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.1279848,"threshold_uncertainty_score":0.8613087,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.05442016849245902,"score_gpt":0.3165076569782083,"score_spread":0.2620874884857493,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}