{"id":"W4408644877","doi":"10.1080/27694127.2025.2464986","title":"Autophagy machinery as exploited by viruses","year":2025,"lang":"en","type":"article","venue":"Autophagy Reports","topic":"Autophagy in Disease and Therapy","field":"Medicine","cited_by":11,"is_retracted":false,"has_abstract":true,"ca_institutions":"","funders":"National Institute of Allergy and Infectious Diseases; National Institute of Mental Health; Natural Sciences and Engineering Research Council of Canada; National Institute of Neurological Disorders and Stroke; National Institute of General Medical Sciences; Novo Nordisk Foundation Center for Basic Metabolic Research; Novo Nordisk; Agence Nationale de Recherches sur le Sida et les Hépatites Virales; Agence Nationale de la Recherche; National Institutes of Health; Schweizerischer Nationalfonds zur Förderung der Wissenschaftlichen Forschung; Styrelsen för Internationellt Utvecklingssamarbete; Helmholtz-Gemeinschaft; International Maternal Pediatric Adolescent AIDS Clinical Trials Network; Deutsche Forschungsgemeinschaft; National Science Foundation","keywords":"Autophagy; Cell biology; Lytic cycle; Biology; Cytosol; Viral replication; Mechanism (biology); ATG8; Vacuole; Virus; Virology; Biochemistry; Apoptosis","routes":{"ca_aff":false,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":true},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0003374101,0.0003112787,0.0004164028,0.0005075093,0.0004298188,0.001569799,0.0002375843,0.0007389185,0.0004541137],"category_scores_gemma":[0.0001916424,0.0001567299,0.0003919922,0.0003349239,0.0005576441,0.0008546464,0.0006682854,0.0006822665,0.000435747],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0007269044,"about_ca_system_score_gemma":0.0003652075,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0003472998,"about_ca_topic_score_gemma":0.000287602,"domain_scores_codex":[0.9996742,0.00007559801,0.00003241389,0.00006637327,0.00007985693,0.0000715362],"domain_scores_gemma":[0.9999353,0.000009995093,0.00001791402,0.000008876637,0.00001507547,0.00001290753],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","study_design_scores_codex":[0.0003806512,0.00003098976,0.001354956,0.002186729,0.00007635634,0.00121684,0.0006557307,0.000615635,0.8887514,0.03584698,0.002562483,0.06632114],"study_design_scores_gemma":[0.00003772408,0.0006440229,0.006868614,0.0005725685,0.000152962,0.008132843,0.000556639,0.001164244,0.5014071,0.01545643,0.4649228,0.00008405191],"study_design_candidate":"observational","study_design_consensus":null,"genre_codex":"review","genre_gemma":"empirical","genre_scores_codex":[0.1996885,0.7453864,0.01161112,0.001617004,0.001079983,0.00007550052,0.0004237505,0.0003117138,0.039806],"genre_scores_gemma":[0.7196243,0.260334,0.006474852,0.001125198,0.0003791155,0.0001028967,0.0005999136,0.00005936087,0.01130038],"genre_candidate":"empirical","genre_consensus":null,"teacher_disagreement_score":0.001569799,"threshold_uncertainty_score":0.005274117,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.008357498702238952,"score_gpt":0.3102255174672757,"score_spread":0.3018680187650368,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}