{"id":"W4408795505","doi":"10.1101/2025.03.21.644473","title":"Gene expression analysis of carbohydrate catabolism in <i>Leucoagaricus gongylophorus</i> LEU18496","year":2025,"lang":"en","type":"preprint","venue":"bioRxiv (Cold Spring Harbor Laboratory)","topic":"Aquaculture Nutrition and Growth","field":"Agricultural and Biological Sciences","cited_by":0,"is_retracted":false,"has_abstract":true,"ca_institutions":"University of New Brunswick","funders":"","keywords":"Catabolism; Carbohydrate; Gene expression; Gene; Computational biology; Chemistry; Biology; Genetics; Biochemistry; Metabolism","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00007929502,0.0004321097,0.0004414934,0.0003363902,0.000119886,0.0003576622,0.000151867,0.0001985862,0.0007607079],"category_scores_gemma":[0.0001671541,0.0001188503,0.0003565866,0.000503975,0.0001513646,0.0001052289,0.0003058824,0.0003002658,0.0004264361],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0002365089,"about_ca_system_score_gemma":0.0001990174,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.002416613,"about_ca_topic_score_gemma":0.002023021,"domain_scores_codex":[0.9998937,0.000008501315,0.000008295034,0.00003816975,0.00003322225,0.00001800441],"domain_scores_gemma":[0.9999174,0.00001623002,0.00002854575,0.000006944395,0.00001329174,0.00001757414],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.00009318332,0.000007612799,0.0008599006,0.0000367615,0.00000470035,0.00003711939,0.00001675294,0.00007914115,0.9976769,0.00000792739,0.00002488649,0.001155112],"study_design_scores_gemma":[0.00004088142,0.0007296237,0.2724266,0.00003852031,0.00008058084,0.0007361633,0.0004336352,0.004403386,0.7138904,0.00009591668,0.007073981,0.00005021031],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9919325,0.0001868663,0.001146754,0.00004645503,0.000009036328,0.00002081365,0.005819197,0.00009784256,0.0007405553],"genre_scores_gemma":[0.9758479,0.0002963379,0.003910119,0.0001227107,0.000009653874,0.00009662768,0.01682234,0.0001320748,0.002762261],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.002416613,"threshold_uncertainty_score":0.004805088,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.01235173698376387,"score_gpt":0.2097009297848742,"score_spread":0.1973491928011103,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}