{"id":"W4408846237","doi":"10.1093/g3journal/jkaf066","title":"Chromosome-level genome assembly of a doubled haploid brook trout ( <i>Salvelinus fontinalis</i> )","year":2025,"lang":"en","type":"article","venue":"G3 Genes Genomes Genetics","topic":"Genomics and Phylogenetic Studies","field":"Biochemistry, Genetics and Molecular Biology","cited_by":4,"is_retracted":false,"has_abstract":true,"ca_institutions":"CelluForce (Canada); McGill University; Parks Canada; Concordia University; McGill Genome Centre; Université Laval","funders":"Canada Foundation for Innovation","keywords":"Salvelinus; Trout; Fontinalis; Biology; Salmo; Ploidy; Genome; Chromosome; Zoology; Genetics; Sequence assembly; Evolutionary biology; Fishery; Gene; Fish <Actinopterygii>","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0003357783,0.000543014,0.0004442628,0.0009886543,0.0005707992,0.0005199924,0.000357102,0.0003794209,0.002267322],"category_scores_gemma":[0.0006526986,0.0003501886,0.0008060222,0.0009485829,0.0001644048,0.0002568881,0.0004501274,0.0005736439,0.001368167],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0006815458,"about_ca_system_score_gemma":0.001031009,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.01183196,"about_ca_topic_score_gemma":0.02149868,"domain_scores_codex":[0.9997932,0.00001843551,0.00001577232,0.0001041726,0.00004861504,0.00001986892],"domain_scores_gemma":[0.9998019,0.00002880917,0.00002931442,0.00002670488,0.00008446688,0.00002874244],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.000375161,0.00003685268,0.006986377,0.0003252783,0.00009608267,0.0004227484,0.000431952,0.003741215,0.9662004,0.0007770652,0.001907607,0.0186993],"study_design_scores_gemma":[0.0002126806,0.0009121546,0.3191363,0.0002299399,0.0007352351,0.001507905,0.0006469193,0.06046175,0.4840789,0.001654424,0.1301908,0.0002329011],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.7882805,0.001343458,0.1298987,0.0002866668,0.0001676032,0.0003607175,0.06913936,0.002570315,0.007952584],"genre_scores_gemma":[0.549431,0.001020806,0.2212131,0.0001802265,0.00003693889,0.0004698575,0.2145676,0.00169833,0.01138225],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.01183196,"threshold_uncertainty_score":0.02352619,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.0175869204958432,"score_gpt":0.2518185365314478,"score_spread":0.2342316160356046,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}