{"id":"W4408977426","doi":"10.1093/biolre/ioaf056","title":"From sperm to offspring: epigenetic markers for dairy herd fertility","year":2025,"lang":"en","type":"article","venue":"Biology of Reproduction","topic":"Genetic and phenotypic traits in livestock","field":"Biochemistry, Genetics and Molecular Biology","cited_by":1,"is_retracted":false,"has_abstract":true,"ca_institutions":"Université Laval; Ministère de l'Agriculture, des Pêcheries et de l'Alimentation","funders":"","keywords":"Biology; Epigenetics; Fertility; Offspring; Genetics; DNA methylation; Quantitative trait locus; Sperm; Single-nucleotide polymorphism; Pregnancy; Population; Genotype; Gene; Demography","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0007719123,0.0002017651,0.0004421535,0.0006814243,0.0001499931,0.0008355993,0.0002769254,0.0004500176,0.001754493],"category_scores_gemma":[0.0007168708,0.0001086575,0.0002141116,0.0008219962,0.00039145,0.0004661508,0.000290165,0.0004307822,0.0003493833],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0003445161,"about_ca_system_score_gemma":0.0003049539,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.000904205,"about_ca_topic_score_gemma":0.001262819,"domain_scores_codex":[0.9997216,0.00006949173,0.00002299861,0.00009284914,0.00007795311,0.00001511209],"domain_scores_gemma":[0.9996612,0.0001656203,0.00008480906,0.00001050966,0.00006192403,0.00001584991],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"design_other","study_design_gemma":"observational","study_design_scores_codex":[0.0004951074,0.000057564,0.05338753,0.006425619,0.0004054352,0.0009430741,0.0006326641,0.0008961443,0.1431457,0.007840831,0.004641929,0.7811284],"study_design_scores_gemma":[0.00004749687,0.001025629,0.4134543,0.002728689,0.001363605,0.005768779,0.001011752,0.002232647,0.07707524,0.01621477,0.4788785,0.0001986452],"study_design_candidate":"observational","study_design_consensus":null,"genre_codex":"review","genre_gemma":"empirical","genre_scores_codex":[0.05620624,0.9236343,0.01075253,0.002689123,0.0003241715,0.00002013853,0.001115328,0.00009265808,0.005165513],"genre_scores_gemma":[0.390475,0.5883704,0.01075253,0.00143909,0.000604418,0.00003759735,0.001164881,0.00002804067,0.007128005],"genre_candidate":"empirical","genre_consensus":null,"teacher_disagreement_score":0.001754493,"threshold_uncertainty_score":0.005869389,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.01414509187666499,"score_gpt":0.2784312770207479,"score_spread":0.2642861851440829,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}