{"id":"W4409020731","doi":"10.1371/journal.ppat.1012636","title":"VAPA mediates lipid exchange between Leishmania amazonensis and host macrophages","year":2025,"lang":"en","type":"article","venue":"PLoS Pathogens","topic":"Research on Leishmaniasis Studies","field":"Medicine","cited_by":5,"is_retracted":false,"has_abstract":true,"ca_institutions":"Institut National de la Recherche Scientifique","funders":"Canadian Institutes of Health Research","keywords":"Endoplasmic reticulum; Biology; Cell biology; Vacuole; Leishmania; Virulence; Amastigote; Phagosome; Lipid droplet; Cytoplasm; Intracellular; Biochemistry; Parasite hosting; Gene","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0003300988,0.0003033878,0.0007224701,0.0003779969,0.0002562971,0.00006329043,0.0001636247,0.0001492634,0.0001663855],"category_scores_gemma":[0.0009512173,0.0002584851,0.0001191916,0.0004988011,0.0002807115,0.00009692878,0.0003197468,0.0003424973,0.000141266],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00009551193,"about_ca_system_score_gemma":0.00008292016,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.00004537216,"about_ca_topic_score_gemma":0.00004245552,"domain_scores_codex":[0.9978132,0.0001152393,0.0003541763,0.0005748497,0.0005251312,0.0006173898],"domain_scores_gemma":[0.9984065,0.0004624611,0.00007365351,0.0005061805,0.0002815683,0.0002696818],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"observational","study_design_scores_codex":[0.00008931204,0.0002426281,0.8514337,0.001054183,0.0009407946,0.0003161253,0.001187833,6.073289e-8,0.1139025,0.00009339841,0.01609631,0.01464318],"study_design_scores_gemma":[0.001471446,0.0003331882,0.9380278,0.0003505826,0.0005985246,0.00001365544,0.0005858844,0.00003031689,0.04697914,0.00009026381,0.01124191,0.000277261],"study_design_candidate":"observational","study_design_consensus":"observational","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9759245,0.005553465,0.00002151183,0.00904087,0.0001372122,0.000755339,0.0001770712,0.0001953054,0.008194747],"genre_scores_gemma":[0.9897137,0.00458322,0.0007369064,0.0006312231,0.0006421329,0.0001189453,0.00003600846,0.00004983965,0.00348801],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.08659416,"threshold_uncertainty_score":0.9999867,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.03075123497219413,"score_gpt":0.2947219052765283,"score_spread":0.2639706703043342,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}