{"id":"W4409103902","doi":"10.1371/journal.pone.0317704","title":"Tracing the evolution of key traits in dorid nudibranchs","year":2025,"lang":"en","type":"article","venue":"PLoS ONE","topic":"Marine Sponges and Natural Products","field":"Biochemistry, Genetics and Molecular Biology","cited_by":3,"is_retracted":false,"has_abstract":true,"ca_institutions":"University of Toronto","funders":"","keywords":"Biology; Phylogenetics; Phylogenetic tree; Evolutionary biology; Clade; Nudibranch; Trait; Most recent common ancestor; Predation; Convergent evolution; Key (lock); Zoology; Ecology; Gene; Mollusca; Genetics","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0004092968,0.0003225641,0.0003598438,0.00163352,0.0006521036,0.0006629791,0.0002851023,0.0004994905,0.00146225],"category_scores_gemma":[0.001007089,0.0002745853,0.0003348929,0.001069498,0.0005478215,0.0008027002,0.0008969906,0.0006050798,0.0004297835],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0005452862,"about_ca_system_score_gemma":0.0002878856,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.001082497,"about_ca_topic_score_gemma":0.002727027,"domain_scores_codex":[0.999801,0.00003802822,0.00001422326,0.00007450153,0.00003890398,0.00003345912],"domain_scores_gemma":[0.9993427,0.0002202698,0.0002047171,0.00006253726,0.00007758699,0.00009223072],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","study_design_scores_codex":[0.0004270694,0.00003378829,0.3638465,0.0003946194,0.0001361519,0.0005690671,0.00172783,0.001776796,0.5953246,0.001157621,0.0001328728,0.03447314],"study_design_scores_gemma":[0.000006135926,0.00009982313,0.9841951,0.00004826307,0.00004962667,0.0006730602,0.0005747313,0.002219003,0.008346707,0.0006053534,0.003155394,0.00002674282],"study_design_candidate":"observational","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9955616,0.0006480027,0.002067339,0.0000470658,0.00000318517,0.000008228396,0.0004204024,0.00002803422,0.001216164],"genre_scores_gemma":[0.993295,0.0005847552,0.004816606,0.00003919334,0.000005968454,0.00001476316,0.0007202657,0.00002825334,0.0004952252],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.00163352,"threshold_uncertainty_score":0.004891694,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.01130220371276364,"score_gpt":0.2163897003476268,"score_spread":0.2050874966348632,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}