{"id":"W4409201763","doi":"10.1101/2025.04.01.646645","title":"A new chromosome-level genome assembly for western painted turtle Chrysemys picta belli, a model for extreme physiological adaptations","year":2025,"lang":"en","type":"preprint","venue":"bioRxiv (Cold Spring Harbor Laboratory)","topic":"Turtle Biology and Conservation","field":"Environmental Science","cited_by":0,"is_retracted":false,"has_abstract":true,"ca_institutions":"","funders":"National Science Foundation","keywords":"Painted turtle; Turtle (robot); Biology; Evolutionary biology; Zoology; Ecology","routes":{"ca_aff":false,"ca_fund":false,"ca_venue":false,"about_ca":true,"invisible_to_affiliation_only":true},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0004430387,0.0009484568,0.0007745274,0.001495534,0.001001584,0.0009554301,0.0007035485,0.0005739746,0.00347614],"category_scores_gemma":[0.0009951532,0.0007040492,0.001154748,0.001477796,0.0002323864,0.000758909,0.0009438112,0.001364054,0.001858962],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0006982909,"about_ca_system_score_gemma":0.001149598,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.008338917,"about_ca_topic_score_gemma":0.01329653,"domain_scores_codex":[0.9996558,0.00002652239,0.00002588491,0.0001666338,0.00008960898,0.00003553064],"domain_scores_gemma":[0.999622,0.0000565033,0.00007055642,0.00005810697,0.0001241667,0.0000687085],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.0005615727,0.00007373558,0.005868785,0.001060942,0.0001403895,0.0008722309,0.0009525538,0.005348853,0.8847361,0.002458823,0.01570481,0.08222128],"study_design_scores_gemma":[0.0002707899,0.000710243,0.1118101,0.0005496446,0.0008878995,0.002933321,0.0007007431,0.06830296,0.3535332,0.004038968,0.4558364,0.0004257759],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"methods","genre_gemma":"empirical","genre_scores_codex":[0.3661561,0.004819531,0.51069,0.001043635,0.0008825171,0.0006267826,0.08839426,0.014627,0.01276021],"genre_scores_gemma":[0.2475781,0.002021694,0.5018183,0.0003218541,0.00009829191,0.0006640658,0.2356765,0.003764608,0.008056635],"genre_candidate":"empirical","genre_consensus":null,"teacher_disagreement_score":0.008338917,"threshold_uncertainty_score":0.01658076,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.06759813545250552,"score_gpt":0.2497287393865171,"score_spread":0.1821306039340116,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}