{"id":"W4409271162","doi":"10.3390/v17040534","title":"Genomic and Epidemiological Investigations Reveal Chromosomal Integration of the Acipenserid Herpesvirus 3 Genome in Lake Sturgeon Acipenser fulvescens","year":2025,"lang":"en","type":"article","venue":"Viruses","topic":"Aquaculture disease management and microbiota","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":true,"ca_institutions":"SickKids Foundation; Hospital for Sick Children; Fisheries and Oceans Canada","funders":"Fisheries and Oceans Canada; University of California, Davis; U.S. Fish and Wildlife Service; Hospital for Sick Children; Manitoba Hydro; Vancouver Island University; Louisiana Department of Wildlife and Fisheries","keywords":"Biology; Acipenser; Genome; Monophyly; Lake sturgeon; Genetics; Sturgeon; Evolutionary biology; Zoology; Phylogenetic tree; Gene; Clade; Fishery","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":true,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001028528,0.0001580273,0.00008630339,0.0008250106,0.0001835856,0.0001515935,0.0001034877,0.0002778108,0.0004602925],"category_scores_gemma":[0.0001817081,0.00009007126,0.0002147423,0.0003733689,0.0001882404,0.0001298784,0.0002012558,0.0001704575,0.00007247944],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0002575488,"about_ca_system_score_gemma":0.0001831169,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.003137591,"about_ca_topic_score_gemma":0.004785093,"domain_scores_codex":[0.9999244,0.000006969816,0.000005346961,0.00002571088,0.00002000111,0.00001747369],"domain_scores_gemma":[0.9998684,0.00002139589,0.00005925712,0.00000673764,0.00001998661,0.00002421731],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","study_design_scores_codex":[0.0002150295,0.00005168302,0.3069398,0.00006319208,0.00002734351,0.0003779049,0.0006377423,0.00016975,0.6842515,0.0001315309,0.00003482737,0.007099699],"study_design_scores_gemma":[0.000005327297,0.0002641719,0.9890686,0.000005926463,0.00002322578,0.0003995266,0.0004116664,0.0003315216,0.009109788,0.00004653778,0.0003297508,0.000004015587],"study_design_candidate":"observational","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9995573,0.00005229735,0.0001372521,0.000005633171,5.483931e-7,0.000004298953,0.00009508714,0.00000347329,0.0001440152],"genre_scores_gemma":[0.9989837,0.00004876259,0.0004258413,0.00001613251,0.000001152688,0.00000736582,0.000362427,0.000001006034,0.0001536425],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.003137591,"threshold_uncertainty_score":0.006238639,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.02447468252874968,"score_gpt":0.265170434249713,"score_spread":0.2406957517209633,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}